BLASTX nr result

ID: Panax21_contig00031262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031262
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-53
ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like ...   195   9e-48
ref|XP_002534345.1| transcription factor, putative [Ricinus comm...   187   2e-45
ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like ...   186   7e-45
emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]   176   4e-42

>ref|XP_002303073.1| predicted protein [Populus trichocarpa] gi|222844799|gb|EEE82346.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  213 bits (542), Expect = 4e-53
 Identities = 124/239 (51%), Positives = 156/239 (65%), Gaps = 27/239 (11%)
 Frame = -3

Query: 636 MEKEYFFNAGIPPP-LHFQPSL------------SPLQMPNN-----FHNPNFEKLMEQY 511
           ME EYFFNAG+PP  L F+P+             SP++M +N       N N+EK  +  
Sbjct: 1   MESEYFFNAGVPPQALLFEPTSTSSSMPVWQSLSSPMEMQDNCSARRLFNSNWEKSTDHS 60

Query: 510 SQFESALSSMVTSPAASNS--ATDTFAIRELKGKLGTIFNT---GEISPEF--LQGVSYI 352
             FES+LSSMV+SP  SN   ++++F +REL G LG I N+   GEISP    +   SYI
Sbjct: 61  PHFESSLSSMVSSPGVSNCNVSSESFMVRELIGNLGNIDNSNNPGEISPHSQPMLAASYI 120

Query: 351 GGGNNSPNSSCYNTPTDSPPQLHLPIMSHFVKEDL--PNLGNPIPMNSALPALSADPGFA 178
              NNS N+SCY TP +SPP+L++P+M  F KE L  P+LG P+ +NS++   +ADPGFA
Sbjct: 121 TAANNSANTSCYTTPLNSPPKLNMPVMDQFSKEHLNIPSLGKPMGLNSSVAEFTADPGFA 180

Query: 177 ERAAKFSCFGSRSFNGRTSQIGLNNAEFQYRSSSLLMGNGKLPRVSSSPFLKEAGSPMG 1
           ERAAKFSCFGSRSFNGR SQ+GLNNAE      + LMGNGKL RV+SSP LK  GS  G
Sbjct: 181 ERAAKFSCFGSRSFNGRISQLGLNNAEMA-NGCNPLMGNGKLARVASSPLLKAVGSQKG 238


>ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 585

 Score =  195 bits (496), Expect = 9e-48
 Identities = 129/256 (50%), Positives = 158/256 (61%), Gaps = 44/256 (17%)
 Frame = -3

Query: 636 MEKEYFFNAGIPPPLHFQPS----------------------------LSPLQMPNNFHN 541
           ME ++F NAG+PP LHF+PS                             S  Q  + F+N
Sbjct: 1   MENQFFLNAGVPPQLHFEPSPHGHQPCPPPSWQSSLSSAMDVQVTVLNCSTEQTQDCFYN 60

Query: 540 --PNFEKLMEQYSQFESALSSMVTSPAASNS--ATDTFAIRELKGKLGTIFNTG---EIS 382
             P ++K  +   QF+SALSSMV+SPAASNS  +++ F IREL GKLG I   G   EIS
Sbjct: 61  TTPTWDKSTDHGLQFDSALSSMVSSPAASNSNISSENFVIRELIGKLGNIGGGGGSDEIS 120

Query: 381 PEF--LQGVS-YIGGGNNSPNSSCYNTPTDSPPQLH---LPIM-SHFVKEDLP-NLGNPI 226
           P    L G S YI   NNS N+SCY+TP  SPP+++   +P M +H VKE +P +L  P+
Sbjct: 121 PHSQPLVGASFYINCNNNSTNTSCYSTPLSSPPKVNTIKIPTMVNHLVKEGMPPSLETPM 180

Query: 225 PMNSALPALSADPGFAERAAKFSCFGSRSFNGRTSQIGLNNAEFQYRSSSLLMGNGK-LP 49
            +NS +   SADPGFAERAAKFSCFGSRS NGRT+Q+GLNNAE   RSS  L+ NGK LP
Sbjct: 181 SLNSTVAKFSADPGFAERAAKFSCFGSRSLNGRTTQLGLNNAELAQRSS--LVENGKRLP 238

Query: 48  RVSSSPFLKEAGSPMG 1
           RVSSSP LK   S MG
Sbjct: 239 RVSSSPSLKVLESQMG 254


>ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
           gi|223525454|gb|EEF28039.1| transcription factor,
           putative [Ricinus communis]
          Length = 554

 Score =  187 bits (475), Expect = 2e-45
 Identities = 117/245 (47%), Positives = 145/245 (59%), Gaps = 39/245 (15%)
 Frame = -3

Query: 627 EYFFNAGIPPP---LHFQPSLSPLQMPNNF-------------------------HNPNF 532
           E+F N GIPPP   LHF+ + +  Q   +F                         ++PN+
Sbjct: 5   EFFLNTGIPPPQLPLHFEQNSTWQQQQQSFSSAMATQANEFKHNNSSSNHLSDCFYDPNW 64

Query: 531 EKLMEQYSQFESALSSMVTSPAASNS--ATDTFAIRELKGKLGTIFNTGEISPEF--LQG 364
           EK  +Q  QF+SALSSMV+SPAASNS  +T++F IREL GKLG + +TGEISP    +  
Sbjct: 65  EKSTDQSLQFDSALSSMVSSPAASNSNISTESFIIRELIGKLGNVGSTGEISPHSQPMLA 124

Query: 363 VSY------IGGGNNSPNSSCYNTPTDSPPQLHLPIMSHFVKEDLPNLGNPIPMNSALPA 202
            SY       G GNNS N+SCY TP  SPP+L++             L  P+ +NS++  
Sbjct: 125 ASYNNKNSITGTGNNSTNTSCYTTPLSSPPKLNM--------SPTDQLSTPLALNSSVAE 176

Query: 201 LSADPGFAERAAKFSCFGSRSFNGRTSQIGLNNAEFQYRSSSLLMGN-GKLPRVSSSPFL 25
            +ADPGFAERAA+FSCFGSRSFNGRTSQ GLN  E Q      LMGN  KLPRVSS+P L
Sbjct: 177 FTADPGFAERAARFSCFGSRSFNGRTSQFGLNKLEMQ------LMGNANKLPRVSSTPSL 230

Query: 24  KEAGS 10
           K  GS
Sbjct: 231 KAVGS 235


>ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
          Length = 586

 Score =  186 bits (471), Expect = 7e-45
 Identities = 121/259 (46%), Positives = 154/259 (59%), Gaps = 47/259 (18%)
 Frame = -3

Query: 636 MEKEYFFNAGIPPPLHFQPS------------------------------LSPLQMPNNF 547
           ME ++F NAG+PP LHF+PS                               S  Q P+ F
Sbjct: 1   MENQFFLNAGVPPQLHFEPSPHHHHHHLCPPPSWQSSLSSAMDVQVTVLNCSTEQNPDCF 60

Query: 546 HN--PNFEKLMEQYS-QFESALSSMVTSPAASNS--ATDTFAIRELKGKLGTI---FNTG 391
           +N  P ++K  + +  QF+SALSSMV+SPAASNS  +++ F IREL GKLG I    +  
Sbjct: 61  YNNTPTWDKSTDHHGLQFDSALSSMVSSPAASNSNMSSENFVIRELIGKLGNIGAGSDEI 120

Query: 390 EISPE---FLQGVSYIGGGNNSPNSSCYNTPTDSPPQLHL----PIMSHFVKEDLP-NLG 235
           EISP     +   SYI   NNS N+SCY+TP  S P++++     ++ H VKE +P +LG
Sbjct: 121 EISPHSQPLVGASSYINCNNNSTNTSCYSTPLSSSPKVNMNKIPTMVKHLVKEGMPLSLG 180

Query: 234 NPIPMNSALPALSADPGFAERAAKFSCFGSRSFNGRTSQIGLNNAEFQYRSSSLL-MGNG 58
               +NS +   SADPGFAERAAK SCFGSRSFNGRT+Q+ LN AE   RSS L+  G  
Sbjct: 181 TSTSLNSTVAEFSADPGFAERAAKLSCFGSRSFNGRTTQLCLNIAELAQRSSPLVENGKK 240

Query: 57  KLPRVSSSPFLKEAGSPMG 1
           +LPRVSSSP LK  GS MG
Sbjct: 241 QLPRVSSSPSLKVLGSQMG 259


>emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
          Length = 569

 Score =  176 bits (447), Expect = 4e-42
 Identities = 110/232 (47%), Positives = 144/232 (62%), Gaps = 20/232 (8%)
 Frame = -3

Query: 636 MEKEYFF----NAGIPPPLHF-------QPSLSPLQMPNNFHNPNFEKLMEQYSQFESAL 490
           MEKE  F    N   PP  +F       + + S   + N F NPN++  M+Q   FESAL
Sbjct: 1   MEKERLFMNEGNCTTPPNWNFGMEIQSNELNCSSQAVQNCFLNPNWDNSMDQSDPFESAL 60

Query: 489 SSMVTSPAASNSAT---DTFAIRELKGKLGTIFNTGEISPEFLQGVSYIGGG-----NNS 334
           SS+V+SP  S++     D+ AIREL G+LG+I N+GEISP+     SYIGGG     NNS
Sbjct: 61  SSIVSSPVGSSAGGMPGDSIAIRELIGRLGSICNSGEISPQ-----SYIGGGGHGNTNNS 115

Query: 333 PNSSCYNTPTDSPPQLHLPIMSHFVKEDLPNL-GNPIPMNSALPALSADPGFAERAAKFS 157
            N+SCYNTP +SPP+L+L IM H   +   N   N +P + +L    ADPGFAERAA+FS
Sbjct: 116 NNTSCYNTPLNSPPKLNLSIMDHQQHQIRTNFPTNHLPTHPSLAPFPADPGFAERAARFS 175

Query: 156 CFGSRSFNGRTSQIGLNNAEFQYRSSSLLMGNGKLPRVSSSPFLKEAGSPMG 1
           CFG+ +F+G ++Q GLN+ E  YRSS+     GKL RVSS+   K AGS +G
Sbjct: 176 CFGTGNFSGLSAQFGLNDTELPYRSST-----GKLSRVSSNQSFKAAGSQLG 222


Top