BLASTX nr result

ID: Panax21_contig00031252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031252
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   225   2e-57
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   219   1e-55
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   217   9e-55
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   216   1e-54
gb|EEC76243.1| hypothetical protein OsI_13676 [Oryza sativa Indi...   214   6e-54

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  225 bits (574), Expect = 2e-57
 Identities = 110/137 (80%), Positives = 126/137 (91%)
 Frame = -3

Query: 462 DSPNVKGISMLARDLQSVLLYDQEGKFAGIRRPNSKLPIEIDGSKIVVVDAIGSSGLNLK 283
           DSPNVKGISMLARDLQS++LYD+EGKFAG+RRPNS LPI+IDG++IV+ DAIGSSGL+LK
Sbjct: 419 DSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTRIVIEDAIGSSGLDLK 478

Query: 282 TDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSLVIGGKTNRAKVEFPEAMNSLLD 103
           TDPGVPIVYAGFGALMLTTCIS+LSH QIWALQDGT++VIGGKTNRAK+EFP+ MN LLD
Sbjct: 479 TDPGVPIVYAGFGALMLTTCISYLSHTQIWALQDGTTVVIGGKTNRAKLEFPDEMNQLLD 538

Query: 102 QVPEIVVSSKSN*SYCI 52
           +VPE+V SS S  S  I
Sbjct: 539 RVPELVESSLSKQSDAI 555


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  219 bits (559), Expect = 1e-55
 Identities = 104/129 (80%), Positives = 123/129 (95%)
 Frame = -3

Query: 462 DSPNVKGISMLARDLQSVLLYDQEGKFAGIRRPNSKLPIEIDGSKIVVVDAIGSSGLNLK 283
           +SP+VKGISMLARDLQS++LYD+EGKFAG+RRPNSKLPI IDGS+IV+VDAIGSSGL LK
Sbjct: 425 NSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSGLELK 484

Query: 282 TDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSLVIGGKTNRAKVEFPEAMNSLLD 103
           TDPGVP+VYAGFGALM+TTCIS+LSH+QIWALQDGT++ +GGKTNRAK+EFPE M+ LLD
Sbjct: 485 TDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTNRAKMEFPEEMSRLLD 544

Query: 102 QVPEIVVSS 76
           +VPEIV S+
Sbjct: 545 KVPEIVESN 553


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  217 bits (552), Expect = 9e-55
 Identities = 104/129 (80%), Positives = 120/129 (93%)
 Frame = -3

Query: 462 DSPNVKGISMLARDLQSVLLYDQEGKFAGIRRPNSKLPIEIDGSKIVVVDAIGSSGLNLK 283
           +SPNVKGISMLARDLQS++LYDQEGKF G+RRPNSKLPI+IDG++IV+ DAIGS+GL LK
Sbjct: 417 NSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGTRIVIEDAIGSTGLELK 476

Query: 282 TDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSLVIGGKTNRAKVEFPEAMNSLLD 103
           TDPGVP+VYAGFGALMLTTCIS+LSH+QIWALQDGTS+V+GGKTNRAK  F + +N LLD
Sbjct: 477 TDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTSMVVGGKTNRAKGVFEDEVNRLLD 536

Query: 102 QVPEIVVSS 76
           QVPEIV SS
Sbjct: 537 QVPEIVESS 545


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  216 bits (551), Expect = 1e-54
 Identities = 103/131 (78%), Positives = 120/131 (91%)
 Frame = -3

Query: 462 DSPNVKGISMLARDLQSVLLYDQEGKFAGIRRPNSKLPIEIDGSKIVVVDAIGSSGLNLK 283
           +SPNVKGISMLARDLQS++LYDQEGKF G+RRPNSKLPI+IDG KI++ DAIGSSGL LK
Sbjct: 294 NSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGMKIIIEDAIGSSGLELK 353

Query: 282 TDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSLVIGGKTNRAKVEFPEAMNSLLD 103
           TDPGVP+VYAGFGALMLTTC+S+LSH+QIWALQDGT++++GGKTNRAK EF   +N LLD
Sbjct: 354 TDPGVPVVYAGFGALMLTTCLSYLSHSQIWALQDGTAVIVGGKTNRAKAEFQYEINFLLD 413

Query: 102 QVPEIVVSSKS 70
           +VPEIV SS S
Sbjct: 414 KVPEIVESSLS 424


>gb|EEC76243.1| hypothetical protein OsI_13676 [Oryza sativa Indica Group]
          Length = 563

 Score =  214 bits (545), Expect = 6e-54
 Identities = 101/126 (80%), Positives = 120/126 (95%)
 Frame = -3

Query: 462 DSPNVKGISMLARDLQSVLLYDQEGKFAGIRRPNSKLPIEIDGSKIVVVDAIGSSGLNLK 283
           DS NVKGISMLARDLQS++LYDQEGKF G+RRP+SKLPIEIDG++IV+ DAIGS+GL+LK
Sbjct: 424 DSSNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEIDGNEIVIEDAIGSTGLDLK 483

Query: 282 TDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSLVIGGKTNRAKVEFPEAMNSLLD 103
           TDPG+PIVYAGFGALMLTTCIS+LSH+QIWALQDG+++VIGGKTNRAK+EF E MN LLD
Sbjct: 484 TDPGIPIVYAGFGALMLTTCISYLSHSQIWALQDGSTVVIGGKTNRAKLEFSEEMNRLLD 543

Query: 102 QVPEIV 85
           +VPE++
Sbjct: 544 KVPELI 549


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