BLASTX nr result

ID: Panax21_contig00031251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031251
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   342   8e-92
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   338   9e-91
ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   332   9e-89
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   328   1e-87
ref|XP_002891495.1| cytochrome c biogenesis protein family [Arab...   327   4e-87

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis
            vinifera] gi|297741415|emb|CBI32546.3| unnamed protein
            product [Vitis vinifera]
          Length = 557

 Score =  342 bits (877), Expect = 8e-92
 Identities = 166/201 (82%), Positives = 188/201 (93%)
 Frame = -1

Query: 1010 VLRKTISVNDPLRYGGITIYQTDWSISALQVLKDDEGPFNLAMAPLQINGDKKLYGTFLP 831
            V+RKTISVNDPLR+ GITIYQTDWS SALQ+ KDDEGPFNLAMAPL++NGDKKL+GTFLP
Sbjct: 355  VMRKTISVNDPLRFDGITIYQTDWSFSALQIRKDDEGPFNLAMAPLKLNGDKKLFGTFLP 414

Query: 830  VGNADSPNVKGISMLARDLQSVVLYDQEGKFAGIRRPNSNLPIEIDGSKIVVVDAIGSSG 651
            VG++DSPNVKGISMLARDLQS+VLYD+EGKFAG+RRPNSNLPI+IDG++IV+ DAIGSSG
Sbjct: 415  VGDSDSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTRIVIEDAIGSSG 474

Query: 650  LNLKTDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSVVIGGKTNRAKVEFPEAMN 471
            L+LKTDPGVPIVYAGFGALMLTTCIS+LSH QIWALQDGT+VVIGGKTNRAK+EFP+ MN
Sbjct: 475  LDLKTDPGVPIVYAGFGALMLTTCISYLSHTQIWALQDGTTVVIGGKTNRAKLEFPDEMN 534

Query: 470  SLLDQVPEIVVSSQSN*SYCI 408
             LLD+VPE+V SS S  S  I
Sbjct: 535  QLLDRVPELVESSLSKQSDAI 555


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
            [Glycine max]
          Length = 563

 Score =  338 bits (868), Expect = 9e-91
 Identities = 162/193 (83%), Positives = 185/193 (95%)
 Frame = -1

Query: 1010 VLRKTISVNDPLRYGGITIYQTDWSISALQVLKDDEGPFNLAMAPLQINGDKKLYGTFLP 831
            V+RKTISVNDPLRYGGITIYQTDWSISALQ+LKD+EGP+NLAMAPLQINGDKKL+GTFLP
Sbjct: 361  VMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLP 420

Query: 830  VGNADSPNVKGISMLARDLQSVVLYDQEGKFAGIRRPNSNLPIEIDGSKIVVVDAIGSSG 651
            VG+ +SP+VKGISMLARDLQS+VLYD+EGKFAG+RRPNS LPI IDGS+IV+VDAIGSSG
Sbjct: 421  VGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVIVDAIGSSG 480

Query: 650  LNLKTDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSVVIGGKTNRAKVEFPEAMN 471
            L LKTDPGVP+VYAGFGALM+TTCIS+LSH+QIWALQDGT+V +GGKTNRAK+EFPE M+
Sbjct: 481  LELKTDPGVPVVYAGFGALMITTCISYLSHSQIWALQDGTTVFVGGKTNRAKMEFPEEMS 540

Query: 470  SLLDQVPEIVVSS 432
             LLD+VPEIV S+
Sbjct: 541  RLLDKVPEIVESN 553


>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
            predicted protein [Populus trichocarpa]
          Length = 432

 Score =  332 bits (851), Expect = 9e-89
 Identities = 160/195 (82%), Positives = 180/195 (92%)
 Frame = -1

Query: 1010 VLRKTISVNDPLRYGGITIYQTDWSISALQVLKDDEGPFNLAMAPLQINGDKKLYGTFLP 831
            V+RKTISVNDPLRYGGIT+YQTDWSISALQV KDDEGPFNLAMAPL+I+GD KLYGTFLP
Sbjct: 230  VMRKTISVNDPLRYGGITMYQTDWSISALQVRKDDEGPFNLAMAPLKISGDNKLYGTFLP 289

Query: 830  VGNADSPNVKGISMLARDLQSVVLYDQEGKFAGIRRPNSNLPIEIDGSKIVVVDAIGSSG 651
            VG+ +SPNVKGISMLARDLQS+VLYDQEGKF G+RRPNS LPI+IDG KI++ DAIGSSG
Sbjct: 290  VGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGMKIIIEDAIGSSG 349

Query: 650  LNLKTDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSVVIGGKTNRAKVEFPEAMN 471
            L LKTDPGVP+VYAGFGALMLTTC+S+LSH+QIWALQDGT+V++GGKTNRAK EF   +N
Sbjct: 350  LELKTDPGVPVVYAGFGALMLTTCLSYLSHSQIWALQDGTAVIVGGKTNRAKAEFQYEIN 409

Query: 470  SLLDQVPEIVVSSQS 426
             LLD+VPEIV SS S
Sbjct: 410  FLLDKVPEIVESSLS 424


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
            gi|223541761|gb|EEF43309.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 556

 Score =  328 bits (841), Expect = 1e-87
 Identities = 161/200 (80%), Positives = 183/200 (91%), Gaps = 4/200 (2%)
 Frame = -1

Query: 1010 VLRKTISVNDPLRYGGITIYQTDWSISALQVLKDDEGPFNLAMAPLQINGDKKLYGTFLP 831
            VLRKTISVN+PLRYGG TIYQTDWS SALQ+ K+DEGPFNLAMAPL+INGDKKL+GTFLP
Sbjct: 353  VLRKTISVNNPLRYGGFTIYQTDWSFSALQIRKNDEGPFNLAMAPLKINGDKKLFGTFLP 412

Query: 830  VGNADSPNVKGISMLARDLQSVVLYDQEGKFAGIRRPNSNLPIEIDGSKIVVVDAIGSSG 651
            VG+ +SPNVKGISMLARDLQS+VLYDQEGKF G+RRPNS LPI+IDG++IV+ DAIGS+G
Sbjct: 413  VGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGTRIVIEDAIGSTG 472

Query: 650  LNLKTDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSVVIGGKTNRAKVEFPEAMN 471
            L LKTDPGVP+VYAGFGALMLTTCIS+LSH+QIWALQDGTS+V+GGKTNRAK  F + +N
Sbjct: 473  LELKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTSMVVGGKTNRAKGVFEDEVN 532

Query: 470  SLLDQVPEIV----VSSQSN 423
             LLDQVPEIV    VSSQS+
Sbjct: 533  RLLDQVPEIVESSSVSSQSD 552


>ref|XP_002891495.1| cytochrome c biogenesis protein family [Arabidopsis lyrata subsp.
            lyrata] gi|297337337|gb|EFH67754.1| cytochrome c
            biogenesis protein family [Arabidopsis lyrata subsp.
            lyrata]
          Length = 550

 Score =  327 bits (837), Expect = 4e-87
 Identities = 155/195 (79%), Positives = 180/195 (92%)
 Frame = -1

Query: 1010 VLRKTISVNDPLRYGGITIYQTDWSISALQVLKDDEGPFNLAMAPLQINGDKKLYGTFLP 831
            VLRKTISVNDPLRYGG+T+YQTDWS SALQV KD EGPFNLAMAP++INGDKKLYGTFLP
Sbjct: 350  VLRKTISVNDPLRYGGVTVYQTDWSFSALQVTKDGEGPFNLAMAPIKINGDKKLYGTFLP 409

Query: 830  VGNADSPNVKGISMLARDLQSVVLYDQEGKFAGIRRPNSNLPIEIDGSKIVVVDAIGSSG 651
            VG+ ++PNVKGISMLARDLQS+V+YD EGKFAGIRRPNS LPIEI+G KIV+ DAIGS+G
Sbjct: 410  VGDTNAPNVKGISMLARDLQSIVVYDLEGKFAGIRRPNSKLPIEINGMKIVIEDAIGSTG 469

Query: 650  LNLKTDPGVPIVYAGFGALMLTTCISFLSHAQIWALQDGTSVVIGGKTNRAKVEFPEAMN 471
            L LKTDPGVP+VYAGFGALMLTTCIS+LSH+QIWALQ+GT++V+GG+TNRAK +FP+ MN
Sbjct: 470  LELKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQNGTTLVVGGRTNRAKNQFPDDMN 529

Query: 470  SLLDQVPEIVVSSQS 426
             LLDQVPE++  + S
Sbjct: 530  RLLDQVPELIKKNTS 544


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