BLASTX nr result

ID: Panax21_contig00031243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031243
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549928.1| PREDICTED: protein-tyrosine phosphatase mito...   105   6e-21
ref|XP_002326465.1| predicted protein [Populus trichocarpa] gi|2...   104   1e-20
gb|ABK95576.1| unknown [Populus trichocarpa]                          104   1e-20
ref|XP_003524059.1| PREDICTED: protein-tyrosine phosphatase mito...   103   3e-20
ref|XP_002511604.1| Protein-tyrosine phosphatase mitochondrial 1...   103   3e-20

>ref|XP_003549928.1| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like
           protein-like [Glycine max]
          Length = 328

 Score =  105 bits (262), Expect = 6e-21
 Identities = 51/80 (63%), Positives = 59/80 (73%)
 Frame = +2

Query: 371 MHIXXXXXXXXXXXXXSGANKELGGGIVVFDAKKVLVGAGARALFYPTLLYNVVRNKIQT 550
           MHI              G ++ +GG    +DAK+VLVGAGARALFYPTL YNVVRNKIQT
Sbjct: 1   MHIEELEGVEVLEGVEEGGSRFVGG----YDAKRVLVGAGARALFYPTLFYNVVRNKIQT 56

Query: 551 EFRWWDQIDEFLLLGAVPFP 610
           EFRWWD++DEF+LLGAVPFP
Sbjct: 57  EFRWWDKVDEFILLGAVPFP 76


>ref|XP_002326465.1| predicted protein [Populus trichocarpa] gi|222833787|gb|EEE72264.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  104 bits (260), Expect = 1e-20
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = +2

Query: 422 GANKELGGGIVVFDAKKVLVGAGARALFYPTLLYNVVRNKIQTEFRWWDQIDEFLLLGAV 601
           G+ KE   G++V+DAK+V +G GARALFYPTLLYNVVRNK+Q EFRWWD++ EF+LLGAV
Sbjct: 23  GSAKEESEGVIVWDAKRVFIGVGARALFYPTLLYNVVRNKVQAEFRWWDRVHEFILLGAV 82

Query: 602 PFP 610
           PFP
Sbjct: 83  PFP 85


>gb|ABK95576.1| unknown [Populus trichocarpa]
          Length = 334

 Score =  104 bits (260), Expect = 1e-20
 Identities = 45/63 (71%), Positives = 55/63 (87%)
 Frame = +2

Query: 422 GANKELGGGIVVFDAKKVLVGAGARALFYPTLLYNVVRNKIQTEFRWWDQIDEFLLLGAV 601
           G+ KE   G++V+DAK+V +G GARALFYPTLLYNVVRNK+Q EFRWWD++ EF+LLGAV
Sbjct: 23  GSAKEESEGVIVWDAKRVFIGVGARALFYPTLLYNVVRNKVQAEFRWWDRVHEFILLGAV 82

Query: 602 PFP 610
           PFP
Sbjct: 83  PFP 85


>ref|XP_003524059.1| PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like
           protein-like [Glycine max]
          Length = 328

 Score =  103 bits (256), Expect = 3e-20
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = +2

Query: 431 KELGGGIVVFDAKKVLVGAGARALFYPTLLYNVVRNKIQTEFRWWDQIDEFLLLGAVPFP 610
           +E G   V +DAK+VLVGAGARALFYPTL YNVVRNKIQ EFRWWD++DEF+LLGAVPFP
Sbjct: 16  EEGGSRFVGYDAKRVLVGAGARALFYPTLFYNVVRNKIQAEFRWWDKVDEFILLGAVPFP 75


>ref|XP_002511604.1| Protein-tyrosine phosphatase mitochondrial 1, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548784|gb|EEF50273.1| Protein-tyrosine phosphatase
           mitochondrial 1, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 324

 Score =  103 bits (256), Expect = 3e-20
 Identities = 44/61 (72%), Positives = 54/61 (88%)
 Frame = +2

Query: 428 NKELGGGIVVFDAKKVLVGAGARALFYPTLLYNVVRNKIQTEFRWWDQIDEFLLLGAVPF 607
           NK    G+V+ DAK+VLVGAGARALFYPTL YNV+RNK+Q+EF WWD++D+F+LLGAVPF
Sbjct: 19  NKIRSSGVVILDAKRVLVGAGARALFYPTLFYNVLRNKLQSEFHWWDRVDQFILLGAVPF 78

Query: 608 P 610
           P
Sbjct: 79  P 79


Top