BLASTX nr result

ID: Panax21_contig00031242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031242
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFT92001.1| gibberellin-regulated protein [Populus tomentosa]...   127   9e-28
ref|XP_002271730.1| PREDICTED: snakin-1 [Vitis vinifera] gi|2960...   126   2e-27
ref|XP_002327192.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_004152264.1| PREDICTED: snakin-1-like [Cucumis sativus] g...   125   3e-27
gb|AGE15499.1| GA-stimulated transcript-like protein 3 [Gossypiu...   124   1e-26

>gb|AFT92001.1| gibberellin-regulated protein [Populus tomentosa]
           gi|407260789|gb|AFT92013.1| gibberellin-regulated
           protein [Populus tomentosa]
          Length = 88

 Score =  127 bits (319), Expect = 9e-28
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = +3

Query: 138 EPTMSTSLYCRRKCKGRCSRAGVLDRCIKYCGICCKQCKCVPSGTYGNKHQCPCYRDMVS 317
           E TM+ S +C  KC  RCS+AG+ DRC+KYCGICC++CKCVPSGTYGNKH+CPCYRDM +
Sbjct: 21  EVTMAASGFCDSKCSARCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKN 80

Query: 318 SKGKPKCP 341
           SKGKPKCP
Sbjct: 81  SKGKPKCP 88


>ref|XP_002271730.1| PREDICTED: snakin-1 [Vitis vinifera] gi|296083093|emb|CBI22497.3|
           unnamed protein product [Vitis vinifera]
          Length = 88

 Score =  126 bits (317), Expect = 2e-27
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +3

Query: 129 CFIEPTMSTSLYCRRKCKGRCSRAGVLDRCIKYCGICCKQCKCVPSGTYGNKHQCPCYRD 308
           CF +PT   + +C  KC  RCS+A VLDRC+KYCGICC++CKCVPSGTYGNKH+CPCYRD
Sbjct: 18  CFSQPTTDGAGFCGLKCSKRCSQAAVLDRCMKYCGICCQECKCVPSGTYGNKHECPCYRD 77

Query: 309 MVSSKGKPKCP 341
             +SKGKPKCP
Sbjct: 78  KKNSKGKPKCP 88


>ref|XP_002327192.1| predicted protein [Populus trichocarpa] gi|222835507|gb|EEE73942.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  126 bits (316), Expect = 2e-27
 Identities = 50/68 (73%), Positives = 59/68 (86%)
 Frame = +3

Query: 138 EPTMSTSLYCRRKCKGRCSRAGVLDRCIKYCGICCKQCKCVPSGTYGNKHQCPCYRDMVS 317
           E TM+ S +C  KC  RCS+AG+ DRC+KYCGICC++CKCVPSGTYGNKH+CPCYRDM +
Sbjct: 21  EVTMAASGFCDSKCSVRCSKAGIKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKN 80

Query: 318 SKGKPKCP 341
           SKGKPKCP
Sbjct: 81  SKGKPKCP 88


>ref|XP_004152264.1| PREDICTED: snakin-1-like [Cucumis sativus]
           gi|449484313|ref|XP_004156848.1| PREDICTED:
           snakin-1-like [Cucumis sativus]
          Length = 89

 Score =  125 bits (315), Expect = 3e-27
 Identities = 51/70 (72%), Positives = 59/70 (84%)
 Frame = +3

Query: 132 FIEPTMSTSLYCRRKCKGRCSRAGVLDRCIKYCGICCKQCKCVPSGTYGNKHQCPCYRDM 311
           FI+   +  ++C +KCK RCS+AGV DRCIKYCGICC  CKCVPSGTYGNKH+CPCYRDM
Sbjct: 20  FIDIVNAKPVFCDKKCKKRCSKAGVKDRCIKYCGICCGYCKCVPSGTYGNKHECPCYRDM 79

Query: 312 VSSKGKPKCP 341
            SSKG+PKCP
Sbjct: 80  RSSKGRPKCP 89


>gb|AGE15499.1| GA-stimulated transcript-like protein 3 [Gossypium hirsutum]
          Length = 90

 Score =  124 bits (310), Expect = 1e-26
 Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
 Frame = +3

Query: 141 PTMST--SLYCRRKCKGRCSRAGVLDRCIKYCGICCKQCKCVPSGTYGNKHQCPCYRDMV 314
           PTM+   S +C  KCKGRC++A V DRC KYCGICC++CKCVPSGTYGNKH+CPCYRD V
Sbjct: 22  PTMAQPRSPFCEGKCKGRCNKAAVWDRCFKYCGICCEECKCVPSGTYGNKHECPCYRDKV 81

Query: 315 SSKGKPKCP 341
           ++KGKPKCP
Sbjct: 82  NNKGKPKCP 90


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