BLASTX nr result

ID: Panax21_contig00031240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031240
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis ...    63   2e-08
emb|CBI31221.3| unnamed protein product [Vitis vinifera]               63   2e-08
emb|CAN74351.1| hypothetical protein VITISV_038575 [Vitis vinifera]    63   2e-08
ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycin...    60   1e-07
ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycin...    59   3e-07

>ref|XP_002269553.2| PREDICTED: exosome component 10-like [Vitis vinifera]
          Length = 931

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
 Frame = +3

Query: 111 KDKGLELENSTNKGGRNQHKGASEHPGDDQNSKNDKDGYVTALPRESLTLSEQVRYSNMD 290
           K+  +E  ++ +  G     G+SE PG+ +  K++KD ++  + RE+   S Q R  + D
Sbjct: 612 KEYHMEPGSTIDGPGSKGQGGSSEPPGESKEVKDEKDSFIPEVARETPASSGQSR--DTD 669

Query: 291 FLHPVSGAE----ATVQVLKKPNRAFGALLGTSAVKRK 392
               VS +E     TVQ+LKKPNRAFG+LLG SA KRK
Sbjct: 670 THTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRK 707


>emb|CBI31221.3| unnamed protein product [Vitis vinifera]
          Length = 901

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
 Frame = +3

Query: 111 KDKGLELENSTNKGGRNQHKGASEHPGDDQNSKNDKDGYVTALPRESLTLSEQVRYSNMD 290
           K+  +E  ++ +  G     G+SE PG+ +  K++KD ++  + RE+   S Q R  + D
Sbjct: 582 KEYHMEPGSTIDGPGSKGQGGSSEPPGESKEVKDEKDSFIPEVARETPASSGQSR--DTD 639

Query: 291 FLHPVSGAE----ATVQVLKKPNRAFGALLGTSAVKRK 392
               VS +E     TVQ+LKKPNRAFG+LLG SA KRK
Sbjct: 640 THTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRK 677


>emb|CAN74351.1| hypothetical protein VITISV_038575 [Vitis vinifera]
          Length = 452

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
 Frame = +3

Query: 111 KDKGLELENSTNKGGRNQHKGASEHPGDDQNSKNDKDGYVTALPRESLTLSEQVRYSNMD 290
           K+  +E  ++ +  G     G+SE PG+ +  K++KD ++  + RE+   S Q R  + D
Sbjct: 108 KEYHMEPGSTIDGPGSKGQGGSSEPPGESKEVKDEKDSFIPEVARETPASSGQSR--DTD 165

Query: 291 FLHPVSGAE----ATVQVLKKPNRAFGALLGTSAVKRK 392
               VS +E     TVQ+LKKPNRAFG+LLG SA KRK
Sbjct: 166 THTSVSQSEKVTEVTVQLLKKPNRAFGSLLGNSASKRK 203


>ref|XP_003551099.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 889

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/75 (45%), Positives = 45/75 (60%)
 Frame = +3

Query: 168 KGASEHPGDDQNSKNDKDGYVTALPRESLTLSEQVRYSNMDFLHPVSGAEATVQVLKKPN 347
           K +S+H       K   +  +   P++SLT++EQ R +N+  L    G  A VQVLKKP 
Sbjct: 594 KESSQHQATSVPIKIKSNSLIFEPPKDSLTIAEQNRDANVGALSTAKGNGAAVQVLKKPT 653

Query: 348 RAFGALLGTSAVKRK 392
            AFGALLG+SA KRK
Sbjct: 654 GAFGALLGSSASKRK 668


>ref|XP_003525715.1| PREDICTED: exosome component 10-like [Glycine max]
          Length = 877

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 10/80 (12%)
 Frame = +3

Query: 183 HPGDDQNSKNDKDGYV----------TALPRESLTLSEQVRYSNMDFLHPVSGAEATVQV 332
           H  D + S N +D  V          +  P++SLT+++Q R +N+  L    G  ATVQV
Sbjct: 585 HTQDSKESSNHQDTNVPINLKSNSLRSEPPKDSLTIADQNRDANVGALSTTKGNGATVQV 644

Query: 333 LKKPNRAFGALLGTSAVKRK 392
           LKKP  AFGALLG SA KRK
Sbjct: 645 LKKPTGAFGALLGNSASKRK 664


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