BLASTX nr result

ID: Panax21_contig00031226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031226
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526973.1| conserved hypothetical protein [Ricinus comm...    92   1e-16
ref|XP_002298558.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
gb|AFK39676.1| unknown [Lotus japonicus]                               79   1e-12
gb|AFK38106.1| unknown [Medicago truncatula]                           79   2e-12
ref|XP_003622327.1| hypothetical protein MTR_7g033080 [Medicago ...    79   2e-12

>ref|XP_002526973.1| conserved hypothetical protein [Ricinus communis]
           gi|223533725|gb|EEF35460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
 Frame = +1

Query: 166 SIAKISYQRLRNEGLWFDEVGDDDNTXXXXXXXXXXXXXXXXXXXXXXXVHKVKIKIPSL 345
           S AK SYQRL NE    D +GD + T                         + ++K+PSL
Sbjct: 3   SAAKFSYQRLNNE----DILGDCEGTERQVARSSRSWQRYRRVHPRK----RFRLKVPSL 54

Query: 346 -KKFLRRRTKVVVASLSKVIKRLKESQSHFGDLFAGNYLFMQITPTSLKYLDK 501
            ++FLRR+  +V A+ +KV+KRLK+ Q+HFGDLFAGNYLF+Q+ PTSLKYL+K
Sbjct: 55  MRRFLRRKVNLVYAAYAKVLKRLKDGQAHFGDLFAGNYLFLQVNPTSLKYLEK 107


>ref|XP_002298558.1| predicted protein [Populus trichocarpa] gi|222845816|gb|EEE83363.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 45/81 (55%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
 Frame = +1

Query: 319 KVKIKIPSLKKFLRRRTKVVVA---SLSKVIKRLKESQSHFGDLFAGNYLFMQITPTSLK 489
           + ++K+PSL +FLRRR K+V A   S +KV+KRLKE Q+HFGDLFAGNYLFMQ+ PT LK
Sbjct: 46  RFRLKVPSLGRFLRRRVKLVSAVRLSCAKVLKRLKEGQAHFGDLFAGNYLFMQVNPTPLK 105

Query: 490 YLDKHSKPNHFRDFSSSAAGY 552
           Y ++    N+  D +S   GY
Sbjct: 106 YFERSYYNNNVLDLNSFPPGY 126


>gb|AFK39676.1| unknown [Lotus japonicus]
          Length = 122

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
 Frame = +1

Query: 163 SSIAKISYQRLRNEGLWFDEVGDDDNTXXXXXXXXXXXXXXXXXXXXXXXVHKVKIKIPS 342
           +S++K  YQRL++EG +  E+  D                            + ++KIPS
Sbjct: 7   ASVSKFRYQRLKHEGGY--EIERD------RVLIQRPKSWFRFRFRRIQIRRRFRLKIPS 58

Query: 343 LKKFLRRRTKVVVA---SLSKVIKRLKESQSHFGDLFAGNYLFMQITPTSLKYLDK 501
           LK+  R+R ++V +   S +KV+KR K+++ HFGDLFAGNYLFMQ+ P+SLKYL+K
Sbjct: 59  LKRLWRKRVRLVSSMRLSYAKVLKRFKDNKVHFGDLFAGNYLFMQVNPSSLKYLEK 114


>gb|AFK38106.1| unknown [Medicago truncatula]
          Length = 117

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
 Frame = +1

Query: 319 KVKIKIPSLKKFLRRRTKVVVA---SLSKVIKRLKESQSHFGDLFAGNYLFMQITPTSLK 489
           + ++KIPSL++  R++TKVV +   S +KV+KR K+ Q HFGDLFAGNYLFMQ+ P+SL 
Sbjct: 46  RFRLKIPSLRRLWRKKTKVVSSMRVSCAKVVKRFKDGQVHFGDLFAGNYLFMQVNPSSLN 105

Query: 490 YLDK 501
           YL K
Sbjct: 106 YLGK 109


>ref|XP_003622327.1| hypothetical protein MTR_7g033080 [Medicago truncatula]
           gi|355497342|gb|AES78545.1| hypothetical protein
           MTR_7g033080 [Medicago truncatula]
          Length = 117

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
 Frame = +1

Query: 319 KVKIKIPSLKKFLRRRTKVVVA---SLSKVIKRLKESQSHFGDLFAGNYLFMQITPTSLK 489
           + ++KIPSL++  R++TKVV +   S +KV+KR K+ Q HFGDLFAGNYLFMQ+ P+SL 
Sbjct: 46  RFRLKIPSLRRLWRKKTKVVSSMRVSCAKVVKRFKDGQVHFGDLFAGNYLFMQVNPSSLN 105

Query: 490 YLDK 501
           YL K
Sbjct: 106 YLGK 109


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