BLASTX nr result

ID: Panax21_contig00031215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031215
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|2...   294   1e-77
ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   290   1e-76
ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   288   7e-76
ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|1...   286   3e-75
gb|AFK34773.1| unknown [Lotus japonicus]                              285   4e-75

>ref|XP_002307293.1| predicted protein [Populus trichocarpa] gi|222856742|gb|EEE94289.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  294 bits (752), Expect = 1e-77
 Identities = 139/196 (70%), Positives = 172/196 (87%)
 Frame = -3

Query: 678 FAHDILAILEEFQVKSCIFVGHSLCGMVGALASVLRPDLFSKIVMVSTSPRFLNTGDYYG 499
           FA+D+LAILEE  V+SCIFVGHS+ GMVG +AS+ RPDLFSKIVM+S SPR+LN  DYYG
Sbjct: 73  FAYDLLAILEELHVESCIFVGHSVSGMVGVIASISRPDLFSKIVMLSASPRYLNDVDYYG 132

Query: 498 GFEIEEIDQLCKAMESNYNSWVSGFAPLVVSGDMESVAVQEFSRTMFNMRPDIALGMFRT 319
           GFE E++DQL +AM++NY +W SGFAPL V GDM+S+AVQEFSRT+FNMRPDIAL + +T
Sbjct: 133 GFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSIAVQEFSRTLFNMRPDIALSVAQT 192

Query: 318 IFTSDLRSLLGHVTVPCHIIQSSRDLAVPVSVSEHLHQNLGGKSIVEIIATEGHLPQLSS 139
           IF SD+R++L  VTVPCHI+QS +DLAVPV  SEHLHQNLGG+SIVE+++++GHLPQLSS
Sbjct: 193 IFHSDMRAILHMVTVPCHILQSMKDLAVPVVASEHLHQNLGGESIVEVMSSDGHLPQLSS 252

Query: 138 PEITIPVLLRHIRLDI 91
           P+I IPVLL+HIR +I
Sbjct: 253 PDIVIPVLLKHIRFNI 268


>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera] gi|147783136|emb|CAN70905.1| hypothetical
           protein VITISV_044176 [Vitis vinifera]
           gi|147795384|emb|CAN74235.1| hypothetical protein
           VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  290 bits (743), Expect = 1e-76
 Identities = 137/196 (69%), Positives = 170/196 (86%)
 Frame = -3

Query: 678 FAHDILAILEEFQVKSCIFVGHSLCGMVGALASVLRPDLFSKIVMVSTSPRFLNTGDYYG 499
           +A+D+LAILEE QV+SCIFVGHS+  M+GA+AS+ RPDLFSK++ ++ SPR+LN  DYYG
Sbjct: 73  YAYDVLAILEELQVQSCIFVGHSVSAMIGAIASITRPDLFSKLISINGSPRYLNDVDYYG 132

Query: 498 GFEIEEIDQLCKAMESNYNSWVSGFAPLVVSGDMESVAVQEFSRTMFNMRPDIALGMFRT 319
           GFE E++DQL +AM SNY +W SGFAPL V GDM+SVAVQEFSRT+FNMRPDIAL + +T
Sbjct: 133 GFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQT 192

Query: 318 IFTSDLRSLLGHVTVPCHIIQSSRDLAVPVSVSEHLHQNLGGKSIVEIIATEGHLPQLSS 139
           IF  DLR +L HVTVPCHI+QS +DLAVPV VSE+LHQNLGG+SIVE++ ++GHLPQLSS
Sbjct: 193 IFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEVMTSDGHLPQLSS 252

Query: 138 PEITIPVLLRHIRLDI 91
           P+I +PVLLRHIR +I
Sbjct: 253 PDIVVPVLLRHIRYNI 268


>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  288 bits (737), Expect = 7e-76
 Identities = 136/196 (69%), Positives = 171/196 (87%)
 Frame = -3

Query: 678 FAHDILAILEEFQVKSCIFVGHSLCGMVGALASVLRPDLFSKIVMVSTSPRFLNTGDYYG 499
           +A+D+LAILEE QV+SC+FVGHS+  MVG +AS+ RPDLF+KIVM+S SPR+LN  DYYG
Sbjct: 73  YAYDLLAILEELQVESCVFVGHSVSAMVGVVASISRPDLFTKIVMISASPRYLNDVDYYG 132

Query: 498 GFEIEEIDQLCKAMESNYNSWVSGFAPLVVSGDMESVAVQEFSRTMFNMRPDIALGMFRT 319
           GFE E+++QL +AME+NY +W SGFAPL V GDM+SVAVQEFSRT+FNMRPDIAL + +T
Sbjct: 133 GFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQT 192

Query: 318 IFTSDLRSLLGHVTVPCHIIQSSRDLAVPVSVSEHLHQNLGGKSIVEIIATEGHLPQLSS 139
           IF SD+RS+L  V+VPCHI+QS +DLAVPV VSE+LHQNLG +SI E+++T+GHLPQLSS
Sbjct: 193 IFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAEVMSTDGHLPQLSS 252

Query: 138 PEITIPVLLRHIRLDI 91
           P++ IPVLLRHIR +I
Sbjct: 253 PDVVIPVLLRHIRHNI 268


>ref|XP_002303383.1| predicted protein [Populus trichocarpa] gi|118489325|gb|ABK96467.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222840815|gb|EEE78362.1| predicted protein [Populus
           trichocarpa]
          Length = 270

 Score =  286 bits (732), Expect = 3e-75
 Identities = 135/196 (68%), Positives = 172/196 (87%)
 Frame = -3

Query: 678 FAHDILAILEEFQVKSCIFVGHSLCGMVGALASVLRPDLFSKIVMVSTSPRFLNTGDYYG 499
           +A+D+LAILEE +V+SCI V HS+ G++GA+AS+ RPDLFSKIVM+S SPR+LN  DYYG
Sbjct: 73  YAYDLLAILEELKVESCILVAHSVSGIIGAIASISRPDLFSKIVMLSASPRYLNDVDYYG 132

Query: 498 GFEIEEIDQLCKAMESNYNSWVSGFAPLVVSGDMESVAVQEFSRTMFNMRPDIALGMFRT 319
           GFE E++DQL +AM++NY +W SGFAPL V GDM+SVAVQEFSRT+FNMRPDIAL + +T
Sbjct: 133 GFEQEDLDQLFEAMQNNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFNMRPDIALSVAQT 192

Query: 318 IFTSDLRSLLGHVTVPCHIIQSSRDLAVPVSVSEHLHQNLGGKSIVEIIATEGHLPQLSS 139
           IF SD+RS+L  VTVPCHI+QS +DLAVPV  +E+LHQNLGG+SIVE+++++GHLPQLSS
Sbjct: 193 IFQSDMRSILHMVTVPCHILQSMKDLAVPVVAAEYLHQNLGGESIVEVMSSDGHLPQLSS 252

Query: 138 PEITIPVLLRHIRLDI 91
           P+I IPVLL+HIR +I
Sbjct: 253 PDIVIPVLLKHIRYNI 268


>gb|AFK34773.1| unknown [Lotus japonicus]
          Length = 271

 Score =  285 bits (730), Expect = 4e-75
 Identities = 134/196 (68%), Positives = 169/196 (86%)
 Frame = -3

Query: 678 FAHDILAILEEFQVKSCIFVGHSLCGMVGALASVLRPDLFSKIVMVSTSPRFLNTGDYYG 499
           +A+D+LAILEE QV+SCIFVGHS+ GM+G +AS+ RPDLFSK++ VS SPR+LN  DY+G
Sbjct: 74  YAYDLLAILEELQVRSCIFVGHSVSGMIGTIASISRPDLFSKLIAVSASPRYLNDVDYFG 133

Query: 498 GFEIEEIDQLCKAMESNYNSWVSGFAPLVVSGDMESVAVQEFSRTMFNMRPDIALGMFRT 319
           GFE E++DQL  AM +NY +W SG+AP+ + GDMESVAVQEFSRT+FNMRPDIAL + +T
Sbjct: 134 GFEQEDLDQLFDAMAANYKAWCSGWAPMAIGGDMESVAVQEFSRTLFNMRPDIALSVLQT 193

Query: 318 IFTSDLRSLLGHVTVPCHIIQSSRDLAVPVSVSEHLHQNLGGKSIVEIIATEGHLPQLSS 139
           IF SD+R +L  VTVPCHIIQS +DLAVPV V+E+LHQ++GG+SIVE+++TEGHLPQLSS
Sbjct: 194 IFQSDMRQVLSLVTVPCHIIQSKKDLAVPVVVAEYLHQHVGGESIVEVMSTEGHLPQLSS 253

Query: 138 PEITIPVLLRHIRLDI 91
           P+I +PVLLRHI  DI
Sbjct: 254 PDIVVPVLLRHICHDI 269


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