BLASTX nr result

ID: Panax21_contig00031208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031208
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]   143   1e-31
dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x h...   141   4e-31
emb|CBI28933.3| unnamed protein product [Vitis vinifera]              140   8e-31
emb|CBI40164.3| unnamed protein product [Vitis vinifera]              140   1e-30
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-30

>emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera]
          Length = 485

 Score =  143 bits (360), Expect = 1e-31
 Identities = 111/378 (29%), Positives = 185/378 (48%), Gaps = 26/378 (6%)
 Frame = -3

Query: 1315 ELIVEILLKLPVKILLRFRSVSKLWRALISNPSFIKIHYDRAAANLQNDFMIVQRMDTVS 1136
            E +V++LL+LPVK ++RF+ V + W+ L ++P FI +H  RA  +  N  M+++ +   S
Sbjct: 86   ENLVDVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMHLRRAITH-NNCCMLLKYL---S 141

Query: 1135 FLHHDSFDSTVVRDSLKYSDRKLSISDEN--IRVVGCCNGLVCLRTREINN-------SE 983
                + +     +D  ++   ++ +  +     +VG  NGL+CL   E NN         
Sbjct: 142  SSEEEVYSLRCDKDFAEFRRLQVPVPSKTDYYHIVGSSNGLICL--TESNNKGSYVTVDT 199

Query: 982  FLWNPA-TKQYKQLPSHGIYIEEFTPSN--SIGFGFDPFTNDYKVIRTNISYKTHSIQAE 812
            FLWNP+ T Q+K LP + I     +P     +GF F P  +DYKV+R     K+ + +  
Sbjct: 200  FLWNPSVTAQWKPLPKYLINNMMTSPFMVVGLGFAFHPQIDDYKVVRIVYFLKSKTYEVH 259

Query: 811  VYSLNLDCWKEINDSLEL-LRDGMTSVCCSGIVNGIPYWIASAN----------LISFDL 665
            VYSL  D WK I+  +   + D ++       VNG  +W+A+            ++SFD+
Sbjct: 260  VYSLKQDAWKNIDAKVHCHIHDTVSRT----FVNGALHWLAAKKNQGRGKSDDLILSFDM 315

Query: 664  RRDVFRKITLPYEDGFDKKYIDKAIVDCRGTVAVAMCTSGEYWVN--FWTMDD-GWGGAW 494
              D  R++ LP E G+D+    K + D +G ++V +  +     N   W MD+ G   +W
Sbjct: 316  VEDNLREMILP-EFGYDESSTQKCLADYKGLLSVLVYNAHRCNDNCDIWVMDEYGVASSW 374

Query: 493  TKKFTVEPIPGMYWIMGSFRNGILVAEDKEGKMFLYDPKNKTIKNVHKADFLGCSNKVCN 314
            TK+FT      +  ++    NG +V ++K G +   DP    I+++ K     C   +  
Sbjct: 375  TKRFTFCLDVEILILLDFLDNGEVVVQNKNGGLVACDPNGGKIRDL-KVAGPAC---LVK 430

Query: 313  YTESLVPIRGSTPVQSMP 260
            Y E+LV  RG  P    P
Sbjct: 431  YIETLVSPRGGNPPVEQP 448


>dbj|BAJ24865.1| S-locus linked F-box protein type-4 [Petunia x hybrida]
          Length = 402

 Score =  141 bits (356), Expect = 4e-31
 Identities = 117/398 (29%), Positives = 190/398 (47%), Gaps = 46/398 (11%)
 Frame = -3

Query: 1324 LPEELIVEILLKLPVKILLRFRSVSKLWRALISNPSFIKIHYDRAAANLQNDFMIVQRM- 1148
            LP+++ + ILL+LPVK+LLRFR VSK    LI + +FI IH DR   + ++++++ +R  
Sbjct: 18   LPQDVFIYILLRLPVKLLLRFRCVSKSCYTLIQSSTFINIHLDRTTTS-EDEYILFKRSF 76

Query: 1147 --DTVSF--------LHHDSFDSTVVRDSLKYSDRKLSISDENIRVVGCCNGLVCLRTRE 998
              D  S+         H+D  D   +   L   +     S +  +++G C+GL+ +    
Sbjct: 77   KEDVESYKGIFSFYSSHNDDGDLNSIFPDLDVPNMTSLYSIDYDKIIGPCHGLIAVMD-- 134

Query: 997  INNSEFLWNPATKQYKQLPS--HGIYIEEFTPSNSIGFGFDPFTNDYKVIRTNISY---- 836
             + S  L+NP+T++Y+ LPS   GI    +   +S GFGFD   NDYKV R +  Y    
Sbjct: 135  -SRSTILFNPSTRKYRLLPSSPFGIPKGYYRSIDSGGFGFDSVVNDYKVFRISDVYTEDR 193

Query: 835  ----KTHSIQAEVYSLNLDCWKEINDSLELLRDGMTSVCCSGIVNGIPYWIASAN----- 683
                +    + EVY + +D W+E+ D ++     +  +  S   NG  +WI + N     
Sbjct: 194  YGYPEEGERKVEVYEVGIDIWREL-DHVDQDLPRLFWLTSSISYNGAYHWITTLNHEDKL 252

Query: 682  -LISFDLRRDVFRKITLPYEDGFDKKYIDKAIVDCRGTVAVAMCTS-------------G 545
             ++ FD+  ++FR I  P    F           C   V +  C S              
Sbjct: 253  IILCFDMSTEIFRNINTPDTRQFSSG-------TCHSLVLLDECLSFMCHPYLGPEIDPT 305

Query: 544  EYWVNFWTMDD-GWGGAWTKKFTVEPIPGMYWIMGSFRNGILVAEDKEGKMFLYDPKNKT 368
               ++ W M D     +WTKK+T+  +P     +  +++ +L+ + K G +  YD K++ 
Sbjct: 306  TDLIDIWMMKDYNVYESWTKKYTIRVLPIDESPLAVWKDSLLIFQGKSGYLMSYDFKSEE 365

Query: 367  IK--NVHKADFLGC--SNKVCNYTESLVPI-RGSTPVQ 269
            +K  N+H     GC  S +   Y ESLVPI RGS   Q
Sbjct: 366  VKEWNLH-----GCQKSMRAIVYKESLVPIPRGSQSTQ 398


>emb|CBI28933.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  140 bits (353), Expect = 8e-31
 Identities = 110/378 (29%), Positives = 185/378 (48%), Gaps = 26/378 (6%)
 Frame = -3

Query: 1315 ELIVEILLKLPVKILLRFRSVSKLWRALISNPSFIKIHYDRAAANLQNDFMIVQRMDTVS 1136
            E +V++LL+LPVK ++RF+ V + W+ L ++P FI ++  RA  +  N  M+++ +   S
Sbjct: 24   ENLVDVLLRLPVKSIIRFKCVCQSWQTLFNDPDFINMNLRRAITH-NNCCMLLKYL---S 79

Query: 1135 FLHHDSFDSTVVRDSLKYSDRKLSISDEN--IRVVGCCNGLVCLRTREINN-------SE 983
                + +     +D  ++   ++ +  +     +VG  NGL+CL   E NN         
Sbjct: 80   SSEEEVYSLRCDKDFAEFRRLQVPVPSKTDYYHIVGSSNGLICL--TESNNKGSYVTVDT 137

Query: 982  FLWNPA-TKQYKQLPSHGIYIEEFTPSN--SIGFGFDPFTNDYKVIRTNISYKTHSIQAE 812
            FLWNP+ T Q+K LP + I     +P     +GF F P  +DYKV+R     K+ + +  
Sbjct: 138  FLWNPSVTAQWKPLPKYLINNMMTSPFMVVGLGFAFHPQIDDYKVVRIVYFLKSKTYEVH 197

Query: 811  VYSLNLDCWKEINDSLEL-LRDGMTSVCCSGIVNGIPYWIASAN----------LISFDL 665
            VYSL  D WK I+  +   + D ++       VNG  +W+A+            ++SFD+
Sbjct: 198  VYSLKQDAWKNIDAKVHCHIHDTVSRT----FVNGALHWLAAKKNQGRGKSDDLILSFDM 253

Query: 664  RRDVFRKITLPYEDGFDKKYIDKAIVDCRGTVAVAMCTSGEYWVN--FWTMDD-GWGGAW 494
              D  R++ LP E G+D+    K + D +G ++V +  +     N   W MD+ G   +W
Sbjct: 254  VEDNLREMILP-EFGYDESSTQKCLADYKGLLSVLVYNAHRCNDNCDIWVMDEYGVASSW 312

Query: 493  TKKFTVEPIPGMYWIMGSFRNGILVAEDKEGKMFLYDPKNKTIKNVHKADFLGCSNKVCN 314
            TK+FT      +  ++    NG +V ++K G +   DP    I+++ K     C   +  
Sbjct: 313  TKRFTFCLDVEILILLDFLDNGEVVVQNKNGGLVACDPNGGKIRDL-KVAGPAC---LVK 368

Query: 313  YTESLVPIRGSTPVQSMP 260
            Y E+LV  RG  P    P
Sbjct: 369  YIETLVSPRGGNPPVEQP 386


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  140 bits (352), Expect = 1e-30
 Identities = 109/381 (28%), Positives = 184/381 (48%), Gaps = 37/381 (9%)
 Frame = -3

Query: 1315 ELIVEILLKLPVKILLRFRSVSKLWRALISNPSFIKIHYDRAAANLQNDFMIVQRMDTVS 1136
            E +++I L+LPVK ++RFR V K W  L  +P FI +H  +A+AN     +         
Sbjct: 23   ENLIDIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRLL--------- 73

Query: 1135 FLHHDSFDSTV--VRDSLKYSD-RKLSI----SDENIRVVGCCNGLVCLRTREINNSE-- 983
            F H  S +  +  +R ++ +++ R+L +      +  ++VG  NGL+CL       S   
Sbjct: 74   FKHLSSSEQEIYSLRSNIAFAEVRRLEVPVPSKTDYYQIVGSSNGLICLTESNFKGSYLS 133

Query: 982  ---FLWNPATKQYKQLPSHGIYIEEFTPS---NSIGFGFDPFTNDYKVIRTNISYKTHSI 821
               FLWNPA ++++ LP +  +I  FT       +GF F P  NDYKV+R     +  + 
Sbjct: 134  LNLFLWNPAIREFQTLPKY--HINNFTSPLMVVGLGFAFHPVINDYKVVRIVYFMRNKTS 191

Query: 820  QAEVYSLNLDCWKEINDSLELLRDGMTSVCC-------SGIVNGIPYWIASAN------- 683
            +A+VYSL    W++++           ++CC          +NG  +W+A          
Sbjct: 192  EADVYSLRTGSWRKVD----------ANICCYIHSNVSRTFINGALHWLAGKKNEMDNTD 241

Query: 682  --LISFDLRRDVFRKITLPYEDGFDKKYIDKAIVDCRGTVAVAMCTSGEYWVN--FWTMD 515
              ++SFD+ +DVF++I LP + G+D + I K + D +G+++V    +     N   W M+
Sbjct: 242  NLILSFDMAKDVFKEIMLP-DFGYD-ELIRKCLADYKGSLSVLFYDAYHSNENCDVWVME 299

Query: 514  D-GWGGAWTKKFTVEPIPGMYWIMGSFRNG-ILVAEDKEGKMFLYDPKNKTIKNVHKADF 341
            + G   +WTK FT+     +      F NG  ++ + K G    ++P     ++      
Sbjct: 300  EYGVAKSWTKHFTIRHEIEIIIPFEFFDNGEAILQKKKSGGFISWNPDGIRFRD------ 353

Query: 340  LGCSN--KVCNYTESLVPIRG 284
            LG S   ++  Y ESLV  RG
Sbjct: 354  LGVSGPARLVEYMESLVSPRG 374


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
            predicted protein [Populus trichocarpa]
          Length = 367

 Score =  137 bits (344), Expect = 9e-30
 Identities = 103/378 (27%), Positives = 181/378 (47%), Gaps = 32/378 (8%)
 Frame = -3

Query: 1324 LPEELIVEILLKLPVKILLRFRSVSKLWRALISNPSFIKIHYDRAAANLQNDFMIVQ--- 1154
            LPE++I+EIL  LPVK LL+F+ V K W  +I++ +FI +H +    N+++  ++     
Sbjct: 9    LPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLAHFVC 68

Query: 1153 -------RMDTVSFLHHDSFDSTVVRDSLKYSDRKLSISDENIRVVGCCNGLVCLRTREI 995
                   + ++++ L H   D  +                   R+ G CNG+  + + + 
Sbjct: 69   PQLLELFQDESLTDLSHQGLDPPI-----------------RGRLCGPCNGIFYVDSEDS 111

Query: 994  NNSEFLWNPATKQYKQLP-------SHGIYIEEFTPSNSIGFGFDPFTNDYKVIRTNISY 836
            + S  LWNPATK++K LP       S  +Y E+     S GFGFDP TNDYKV+    SY
Sbjct: 112  SGSG-LWNPATKEFKLLPEKIRNKSSLPLYYED-----SYGFGFDPVTNDYKVVVIRESY 165

Query: 835  -------KTHSIQAEVYSLNLD---CWKEINDSLELLRDGMTSVCCSGIVNGIPYWIASA 686
                   K  S    VY+L  D   CW  ++    LL +      C   V+G+ YW A  
Sbjct: 166  TREYYLEKFPSSLVIVYTLRTDSWRCWGSLDQGYTLLGN-----YCYTNVDGVYYWQAGH 220

Query: 685  N-----LISFDLRRDVFRKITLPYEDGFDKKYIDKAIVDCRGTVAVAMCTSGEYWVNFWT 521
                  ++SF++  D F++I    E  +DK      ++    ++A +   + E +++ W 
Sbjct: 221  GVHMNVILSFNMATDAFQEI---QEPDYDKPAYSTRLILYHDSIAFSTVHNVEKFLDIWV 277

Query: 520  MDDGWGGAWTKKFTVEPIPGMYWIMGSFRNGILVAEDKEGKMFLYDPKNKTIKNVHKADF 341
            +++   G W ++F   P+  +   +  ++NG ++ +    ++ LYD   + +K++ +   
Sbjct: 278  LNE---GCWIRQFKSRPLLELRNPVAHWKNGNVILDSDNDQLMLYDTNKQELKDL-RFKG 333

Query: 340  LGCSNKVCNYTESLVPIR 287
             G   ++  Y ESLV I+
Sbjct: 334  TGVCYEILVYRESLVSIK 351


Top