BLASTX nr result

ID: Panax21_contig00031206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031206
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|3VX8|B Chain B, Crystal Structure Of Arabidopsis Thaliana At...   157   6e-37
ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrat...   157   6e-37
dbj|BAE98447.1| autophagocytosis protein - like [Arabidopsis tha...   157   6e-37
gb|AAM66117.1| autophagocytosis protein-like [Arabidopsis thaliana]   157   6e-37
ref|NP_568934.1| autophagy-related protein 3 [Arabidopsis thalia...   157   6e-37

>pdb|3VX8|B Chain B, Crystal Structure Of Arabidopsis Thaliana Atg7ntd-Atg3
           Complex gi|414145391|pdb|3VX8|C Chain C, Crystal
           Structure Of Arabidopsis Thaliana Atg7ntd-Atg3 Complex
          Length = 292

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = +3

Query: 3   KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 182
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 217 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 276

Query: 183 IEYDYTMDFDLGSSST 230
           IEYDYTMDFDLGSSST
Sbjct: 277 IEYDYTMDFDLGSSST 292


>ref|XP_002866439.1| autophagy 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297312274|gb|EFH42698.1| autophagy 3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 313

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = +3

Query: 3   KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 182
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 238 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 297

Query: 183 IEYDYTMDFDLGSSST 230
           IEYDYTMDFDLGSSST
Sbjct: 298 IEYDYTMDFDLGSSST 313


>dbj|BAE98447.1| autophagocytosis protein - like [Arabidopsis thaliana]
          Length = 313

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = +3

Query: 3   KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 182
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 238 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 297

Query: 183 IEYDYTMDFDLGSSST 230
           IEYDYTMDFDLGSSST
Sbjct: 298 IEYDYTMDFDLGSSST 313


>gb|AAM66117.1| autophagocytosis protein-like [Arabidopsis thaliana]
          Length = 313

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = +3

Query: 3   KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 182
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 238 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 297

Query: 183 IEYDYTMDFDLGSSST 230
           IEYDYTMDFDLGSSST
Sbjct: 298 IEYDYTMDFDLGSSST 313


>ref|NP_568934.1| autophagy-related protein 3 [Arabidopsis thaliana]
           gi|147742948|sp|Q0WWQ1.2|ATG3_ARATH RecName:
           Full=Autophagy-related protein 3; AltName:
           Full=Autophagy-related E2-like conjugation enzyme ATG3;
           Short=AtAPG3; Short=Protein autophagy 3
           gi|19912141|dbj|BAB88382.1| autophagy 3 [Arabidopsis
           thaliana] gi|89000923|gb|ABD59051.1| At5g61500
           [Arabidopsis thaliana] gi|332010093|gb|AED97476.1|
           autophagy-related protein 3 [Arabidopsis thaliana]
          Length = 313

 Score =  157 bits (398), Expect = 6e-37
 Identities = 75/76 (98%), Positives = 76/76 (100%)
 Frame = +3

Query: 3   KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 182
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKF+ASVIPT
Sbjct: 238 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 297

Query: 183 IEYDYTMDFDLGSSST 230
           IEYDYTMDFDLGSSST
Sbjct: 298 IEYDYTMDFDLGSSST 313


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