BLASTX nr result

ID: Panax21_contig00031202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031202
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27790.3| unnamed protein product [Vitis vinifera]              328   4e-88
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   328   4e-88
ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|2...   306   1e-81
ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsi...   306   2e-81
ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago trun...   301   6e-80

>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  328 bits (842), Expect = 4e-88
 Identities = 156/182 (85%), Positives = 173/182 (95%)
 Frame = +3

Query: 66  MKKSALPLQNICGAKKQRCGKGALVKLLRWHFGHSQFRGKQLEAIEAVLSGRDCFCLMPT 245
           MKKS LP+Q++ G +K+ CGK ALVKLLRWHFGH++FRG+QLEAIEA+LSGRDCFCLMPT
Sbjct: 1   MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPT 60

Query: 246 GGGKSMCYQIPALIKTGIVLVVCPLIALMENQVMSLKEKGIAAEFLSSSQTSNIKDKIHE 425
           GGGKSMCYQIPAL K GIVLVVCPLIALMENQVM+LKEKGIAAEFLSS+QT+ ++DKIHE
Sbjct: 61  GGGKSMCYQIPALAKPGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTQTTKVRDKIHE 120

Query: 426 DLESGKPSLRLLYVTPELIATPGFMLKLTKVHARGLLNLIAIDEAHCISSWGHDFRPSYR 605
           DL+SGKPSLRLLYVTPELIATPGFM +LTK+HARGLLNLIAIDEAHCISSWGHDFRPSYR
Sbjct: 121 DLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWGHDFRPSYR 180

Query: 606 KL 611
           KL
Sbjct: 181 KL 182


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  328 bits (842), Expect = 4e-88
 Identities = 156/182 (85%), Positives = 173/182 (95%)
 Frame = +3

Query: 66  MKKSALPLQNICGAKKQRCGKGALVKLLRWHFGHSQFRGKQLEAIEAVLSGRDCFCLMPT 245
           MKKS LP+Q++ G +K+ CGK ALVKLLRWHFGH++FRG+QLEAIEA+LSGRDCFCLMPT
Sbjct: 1   MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPT 60

Query: 246 GGGKSMCYQIPALIKTGIVLVVCPLIALMENQVMSLKEKGIAAEFLSSSQTSNIKDKIHE 425
           GGGKSMCYQIPAL K GIVLVVCPLIALMENQVM+LKEKGIAAEFLSS+QT+ ++DKIHE
Sbjct: 61  GGGKSMCYQIPALAKPGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTQTTKVRDKIHE 120

Query: 426 DLESGKPSLRLLYVTPELIATPGFMLKLTKVHARGLLNLIAIDEAHCISSWGHDFRPSYR 605
           DL+SGKPSLRLLYVTPELIATPGFM +LTK+HARGLLNLIAIDEAHCISSWGHDFRPSYR
Sbjct: 121 DLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWGHDFRPSYR 180

Query: 606 KL 611
           KL
Sbjct: 181 KL 182


>ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|222836810|gb|EEE75203.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  306 bits (785), Expect = 1e-81
 Identities = 152/183 (83%), Positives = 165/183 (90%), Gaps = 1/183 (0%)
 Frame = +3

Query: 66  MKKSALPL-QNICGAKKQRCGKGALVKLLRWHFGHSQFRGKQLEAIEAVLSGRDCFCLMP 242
           MKKS LP+ QN     ++R  K  LVKLLRWHFG+  FRGKQLEAIEAVLSGRDCFCLMP
Sbjct: 1   MKKSPLPMVQNTSSKDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMP 60

Query: 243 TGGGKSMCYQIPALIKTGIVLVVCPLIALMENQVMSLKEKGIAAEFLSSSQTSNIKDKIH 422
           TGGGKSMCYQIPAL K GIVLVV PLIALMENQVM+LKEKGIAAEFLSS+QTS++++KIH
Sbjct: 61  TGGGKSMCYQIPALAKRGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSSVRNKIH 120

Query: 423 EDLESGKPSLRLLYVTPELIATPGFMLKLTKVHARGLLNLIAIDEAHCISSWGHDFRPSY 602
           EDL+SGKPS+RLLYVTPELIATPGFM KLTK+H RGLLNLIAIDEAHCISSWGHDFRPSY
Sbjct: 121 EDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNLIAIDEAHCISSWGHDFRPSY 180

Query: 603 RKL 611
           RKL
Sbjct: 181 RKL 183


>ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
           gi|75334307|sp|Q9FT72.1|RQL3_ARATH RecName:
           Full=ATP-dependent DNA helicase Q-like 3; AltName:
           Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3
           gi|11121447|emb|CAC14867.1| DNA Helicase [Arabidopsis
           thaliana] gi|332661156|gb|AEE86556.1| ATP-dependent DNA
           helicase Q-like 3 [Arabidopsis thaliana]
          Length = 713

 Score =  306 bits (784), Expect = 2e-81
 Identities = 148/182 (81%), Positives = 167/182 (91%)
 Frame = +3

Query: 66  MKKSALPLQNICGAKKQRCGKGALVKLLRWHFGHSQFRGKQLEAIEAVLSGRDCFCLMPT 245
           MKKS LP+QN+  + K   GK ALVKLLRWHFGH+ FRGKQLEAI+AV+SGRDCFCLMPT
Sbjct: 1   MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT 60

Query: 246 GGGKSMCYQIPALIKTGIVLVVCPLIALMENQVMSLKEKGIAAEFLSSSQTSNIKDKIHE 425
           GGGKS+CYQIPAL K GIVLVV PLIALMENQVM+LKEKGIAAE+LSS+Q +++K+KIHE
Sbjct: 61  GGGKSICYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAAEYLSSTQATHVKNKIHE 120

Query: 426 DLESGKPSLRLLYVTPELIATPGFMLKLTKVHARGLLNLIAIDEAHCISSWGHDFRPSYR 605
           DL+SGKPS+RLLYVTPELIAT GFMLKL K+H+RGLLNLIAIDEAHCISSWGHDFRPSYR
Sbjct: 121 DLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYR 180

Query: 606 KL 611
           +L
Sbjct: 181 QL 182


>ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
           gi|355484365|gb|AES65568.1| ATP-dependent DNA helicase
           Q1 [Medicago truncatula]
          Length = 776

 Score =  301 bits (771), Expect = 6e-80
 Identities = 149/186 (80%), Positives = 164/186 (88%), Gaps = 2/186 (1%)
 Frame = +3

Query: 60  REMKKSALPLQNICGAKK--QRCGKGALVKLLRWHFGHSQFRGKQLEAIEAVLSGRDCFC 233
           + +KKS LPL    G KK  + C K +LVK+LRWHFG+  FRG QLEAI+AVLSGRDCFC
Sbjct: 3   KNVKKSPLPLIETSGNKKKLELCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFC 62

Query: 234 LMPTGGGKSMCYQIPALIKTGIVLVVCPLIALMENQVMSLKEKGIAAEFLSSSQTSNIKD 413
           LMPTGGGKSMCYQIPAL K GIVLVVCPLIALMENQVM+LKEKGIAAEFLSS++T+  KD
Sbjct: 63  LMPTGGGKSMCYQIPALAKEGIVLVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKD 122

Query: 414 KIHEDLESGKPSLRLLYVTPELIATPGFMLKLTKVHARGLLNLIAIDEAHCISSWGHDFR 593
           KIHEDL SGKPS RLLYVTPELIATPGFM KLTK+H+RGLL+LIAIDEAHCISSWGHDFR
Sbjct: 123 KIHEDLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFR 182

Query: 594 PSYRKL 611
           P+YRKL
Sbjct: 183 PTYRKL 188


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