BLASTX nr result
ID: Panax21_contig00031182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00031182
(885 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 311 1e-82
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 272 7e-78
ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|2... 273 4e-71
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 268 2e-69
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 248 9e-69
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 311 bits (797), Expect = 1e-82
Identities = 151/237 (63%), Positives = 189/237 (79%)
Frame = -1
Query: 714 MHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRF 535
M+R+LG RL+YRA+ +YVK+GLIDQA++ FDEMT+S CRVFSIDYNR IGVL+ QSRF
Sbjct: 1 MYRSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRF 60
Query: 534 DLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIY 355
DLAE YYD + P+GFSLN+FTYSRF+SGLCK K+F +I+KLL+DMDRLG VPD+WA NIY
Sbjct: 61 DLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIY 120
Query: 354 LYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGI 175
L LLC EN +D+AL V+Q M EKGREPD+V+YTIVI+GLC+A R D+AV +W+ M+ KG
Sbjct: 121 LNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGF 180
Query: 174 VPDDRACRALVLGLCDGGKVDLAYELTLGVMKVELSLAHQFTMCLLVGFVALAGLTK 4
PD++ACRALVLGLC GKVDLAYELT+G M+ + + L+ GF + K
Sbjct: 181 SPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDK 237
Score = 79.3 bits (194), Expect(2) = 7e-14
Identities = 46/206 (22%), Positives = 96/206 (46%)
Frame = -1
Query: 714 MHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRF 535
M + + + Y + + ++G ID+A + M ++GC + YN ++ +
Sbjct: 211 MRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLL 270
Query: 534 DLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIY 355
+ AE+ + G + ++Y+ L GLCK + ++ + + D+ + N
Sbjct: 271 EEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTI 330
Query: 354 LYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGI 175
+ LC+ + A ++ + M KG PD+V++TI+I + + A ++ M G G+
Sbjct: 331 IKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGL 390
Query: 174 VPDDRACRALVLGLCDGGKVDLAYEL 97
+PD +V LC GK+ +A+ +
Sbjct: 391 LPDRVLYTTIVDHLCKTGKMGMAHSV 416
Score = 24.3 bits (51), Expect(2) = 7e-14
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 52 YNVLISGFCCAGRIDKA 2
YN LI+G C A R+ +A
Sbjct: 432 YNALINGLCRASRVSEA 448
Score = 77.4 bits (189), Expect = 4e-12
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 2/195 (1%)
Frame = -1
Query: 684 SYRAKTFNYVKSGLIDQA-VQVFDEMTQSG-CRVFSIDYNRIIGVLISQSRFDLAEHYYD 511
SY K+ +D+A + + ++M G C V S YN II L + S A ++
Sbjct: 291 SYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVS--YNTIIKALCTASHTKRAYKLFE 348
Query: 510 TINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSEN 331
+ KG + + T++ + + I +KLL M LG +PD + LC
Sbjct: 349 EMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTG 408
Query: 330 LVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACR 151
+ MA V M E G PD+VSY +I+GLC+A R+ A+ +++ M G PD+ +
Sbjct: 409 KMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFK 468
Query: 150 ALVLGLCDGGKVDLA 106
++ GL K+ +A
Sbjct: 469 LIIGGLIWEKKLSVA 483
Score = 67.0 bits (162), Expect = 6e-09
Identities = 41/165 (24%), Positives = 74/165 (44%)
Frame = -1
Query: 636 QAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDTINPKGFSLNTFTYSRFL 457
+A ++F+EM G + + +I + + ++A+ D + G + Y+ +
Sbjct: 342 RAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIV 401
Query: 456 SGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGRE 277
LCK + + DM G PD+ + N + LC + V A+ + + M G
Sbjct: 402 DHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPC 461
Query: 276 PDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRALV 142
PD V++ ++I GL ++L A R+W M+ KG D LV
Sbjct: 462 PDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLV 506
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 272 bits (695), Expect(2) = 7e-78
Identities = 126/212 (59%), Positives = 168/212 (79%)
Frame = -1
Query: 714 MHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRF 535
M+++LG RL YR++ YVK+GLID+AVQVFDEM+QS CRVFSIDYNR IGVLI+ SRF
Sbjct: 1 MYQSLGAHRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRF 60
Query: 534 DLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIY 355
DLA HYY + +GFSL++FTYSRF++GLCK K+F I +LL DM+ L +PD+WA NIY
Sbjct: 61 DLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIY 120
Query: 354 LYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGI 175
L+LL E +D+ALEV + + + GR+PD+V+YTI+I G+CK ++ D A++ W+ M+ KG
Sbjct: 121 LHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGF 180
Query: 174 VPDDRACRALVLGLCDGGKVDLAYELTLGVMK 79
PD++AC A+V+GLCDG KVDLAYEL + VMK
Sbjct: 181 SPDNKACGAIVVGLCDGRKVDLAYELIIDVMK 212
Score = 45.8 bits (107), Expect(2) = 7e-78
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3
Query: 79 GRVKFSTSIYNVLISGFCCAGRIDKA 2
GRVK ST +YN LISGFC AGRIDKA
Sbjct: 214 GRVKLSTLVYNALISGFCRAGRIDKA 239
Score = 83.6 bits (205), Expect = 6e-14
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Frame = -1
Query: 648 GLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDTINPKGFSLNTFTY 469
G ID A++VF+++ ++G + + Y II + +FD A ++ + KGFS +
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKAC 187
Query: 468 SRFLSGLCKFKDFEIIQKLLKDMDRLGAVP-DMWACNIYLYLLCSENLVDMALEVLQLMA 292
+ GLC + ++ +L+ D+ + G V N + C +D A + M
Sbjct: 188 GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMR 247
Query: 291 EKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVD 112
G EPD+V+Y + ++ C LD A ++ ++M GI PD + L+ G+C G D
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPD 307
Query: 111 LAYELTLGVM 82
AY L M
Sbjct: 308 KAYLLMTNKM 317
Score = 81.6 bits (200), Expect = 2e-13
Identities = 47/184 (25%), Positives = 84/184 (45%)
Frame = -1
Query: 687 LSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDT 508
+SY + K G A ++F+EM Q G + + I + + F++A+ D
Sbjct: 326 VSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQ 385
Query: 507 INPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENL 328
+ G S + Y+ + LCK E+ + DM G PD+ + N + C +
Sbjct: 386 MTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSR 445
Query: 327 VDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRA 148
V A+ + + M +G PD V+Y ++I GL + +++ A +W M+ KG D +
Sbjct: 446 VSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQT 505
Query: 147 LVLG 136
L+ G
Sbjct: 506 LIRG 509
Score = 78.6 bits (192), Expect = 2e-12
Identities = 43/159 (27%), Positives = 75/159 (47%)
Frame = -1
Query: 582 IDYNRIIGVLISQSRFDLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKD 403
+ YN II A ++ + KG + T++ F+ F I +KLL
Sbjct: 326 VSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQ 385
Query: 402 MDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARR 223
M +G PD + LC V+MA + M E+G PD++S+ +I+G CK R
Sbjct: 386 MTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSR 445
Query: 222 LDAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVDLA 106
+ A+ +++ M +G PD+ + ++ GL + K+ +A
Sbjct: 446 VSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIA 484
Score = 78.2 bits (191), Expect = 2e-12
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Frame = -1
Query: 687 LSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDT 508
L Y A + ++G ID+A + M ++GC + YN + + D A+
Sbjct: 221 LVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKL 280
Query: 507 INPKGFSLNTFTYSRFLSGLCK-----------------------------------FKD 433
+ G + ++Y++ L G+CK D
Sbjct: 281 MERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGD 340
Query: 432 FEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGREPDMVSYTI 253
KL ++M + G PD+ I++ + ++A ++L M E G PD + YT
Sbjct: 341 TTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTT 400
Query: 252 VISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVDLAYEL 97
+I LCK+ +++ A ++ M+ +GI PD + AL+ G C +V A L
Sbjct: 401 IIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHL 452
>ref|XP_002312667.1| predicted protein [Populus trichocarpa] gi|222852487|gb|EEE90034.1|
predicted protein [Populus trichocarpa]
Length = 512
Score = 273 bits (698), Expect = 4e-71
Identities = 138/234 (58%), Positives = 169/234 (72%)
Frame = -1
Query: 714 MHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRF 535
M++ LG RL YR + +YVK+GLID AV+VFDEMT S CRVF IDYNR IGVLI SRF
Sbjct: 1 MYQPLGVHRLIYRTRIASYVKAGLIDYAVKVFDEMTLSECRVFGIDYNRFIGVLIRHSRF 60
Query: 534 DLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIY 355
DLA HYY + P GFSL++FTYSRF+SGLC+ K+F I LLKDM++L VPD+WA NIY
Sbjct: 61 DLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNIY 120
Query: 354 LYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGI 175
L LL EN + ALEV M E+GREPD+V++TI+I GLCK ++ DAAV+ W ML KGI
Sbjct: 121 LNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGI 180
Query: 174 VPDDRACRALVLGLCDGGKVDLAYELTLGVMKVELSLAHQFTMCLLVGFVALAG 13
PD++AC AL +GLCDGG+VDLAYEL +GV+ LS L+ AG
Sbjct: 181 RPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAG 234
Score = 78.2 bits (191), Expect = 2e-12
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 39/238 (16%)
Frame = -1
Query: 687 LSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDT 508
L Y A + ++G ID+A+ + M+++GC+ + YN ++ ++ F+ A
Sbjct: 221 LVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKK 280
Query: 507 IN------------------------------------PKGFSLNTFTYSRFLSGLCKFK 436
+ PKGF + +Y+ + C
Sbjct: 281 MECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYNTIIKAFCSIS 339
Query: 435 DFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGREPDMVSYT 256
+ KL ++M R G PD+ I + E DMA ++L LMA G PD + YT
Sbjct: 340 NNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYT 399
Query: 255 IVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRALVLGLCDG---GKVDLAYELTL 91
+I CK+ +++ A ++ M+ KGI PD + AL+ G C G+V YE L
Sbjct: 400 TIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQML 457
Score = 71.2 bits (173), Expect = 3e-10
Identities = 46/173 (26%), Positives = 84/173 (48%)
Frame = -1
Query: 582 IDYNRIIGVLISQSRFDLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKD 403
+ YN II S S A ++ + KG + + T++ + + + ++ +KLL
Sbjct: 326 VSYNTIIKAFCSISNNRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDL 385
Query: 402 MDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARR 223
M +G +PD + C V+MA + M EKG PD+VSY +I+G CK+ R
Sbjct: 386 MAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLR 445
Query: 222 LDAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVDLAYELTLGVMKVELSL 64
+ + +++ ML +G PD+ + ++ L K+ A + +M+ L+L
Sbjct: 446 VGEVMHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTL 498
Score = 68.2 bits (165), Expect = 2e-09
Identities = 37/157 (23%), Positives = 72/157 (45%)
Frame = -1
Query: 636 QAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDTINPKGFSLNTFTYSRFL 457
+A ++F+EM + G + + +I + + D+A+ D + G + Y+ +
Sbjct: 343 RAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTII 402
Query: 456 SGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGRE 277
CK E+ + DM G PD+ + N + C V + + + M ++G
Sbjct: 403 DHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSF 462
Query: 276 PDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPD 166
PD V+Y ++I L + +L A R+W M+ +G+ D
Sbjct: 463 PDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLD 499
Score = 59.3 bits (142), Expect = 1e-06
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 7/198 (3%)
Frame = -1
Query: 669 TFNYVKSGL-----IDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDTI 505
TF + GL D AVQ + M G R + + L + DLA +
Sbjct: 151 TFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGV 210
Query: 504 NPKGFS-LNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENL 328
G S ++T Y+ +SG C+ + ++ M R G PD+ N+ L C+E +
Sbjct: 211 ISGGLSEVSTLVYNALISGFCRAGRIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFM 270
Query: 327 VDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAA-VRMWQIMLGKGIVPDDRACR 151
+ A+++L+ M EPD+ SY ++ CKA D A + M M+ KG D +
Sbjct: 271 FEEAVKLLKKMECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFC-DVVSYN 329
Query: 150 ALVLGLCDGGKVDLAYEL 97
++ C AY+L
Sbjct: 330 TIIKAFCSISNNRRAYKL 347
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 268 bits (684), Expect = 2e-69
Identities = 133/237 (56%), Positives = 172/237 (72%)
Frame = -1
Query: 714 MHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRF 535
M+ LG RL +RA VK GLID+A+++FDEMTQS C V S DYNR IGVLIS+SRF
Sbjct: 1 MYHRLGANRLVFRASITKCVKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRF 60
Query: 534 DLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIY 355
DLAE YY + P+GFSL FTYSRF+S LC+ K+F +I +LL+DM +LG +PD+WA NIY
Sbjct: 61 DLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIY 120
Query: 354 LYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGI 175
L LL ENL+++AL+ M KGREPD+V+YTI++ LCKA++ D AV W+ M+ KG+
Sbjct: 121 LNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGL 180
Query: 174 VPDDRACRALVLGLCDGGKVDLAYELTLGVMKVELSLAHQFTMCLLVGFVALAGLTK 4
PD +AC ALV+GLCDGGKVDLAYELT+G MK E+ + L+ GF ++K
Sbjct: 181 SPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISK 237
Score = 73.9 bits (180), Expect = 5e-11
Identities = 48/196 (24%), Positives = 93/196 (47%)
Frame = -1
Query: 684 SYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDTI 505
SY K+ +D+A ++ + M + G ++ YN +IG L A ++ +
Sbjct: 291 SYNQLLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEM 349
Query: 504 NPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENLV 325
K + + T++ + I + LL+ M + +PD+ + C +
Sbjct: 350 GQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKI 409
Query: 324 DMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRAL 145
+MA V + M E G PD+VSY +I+GLCKA ++ A+ +++ M +G PD+ + +
Sbjct: 410 EMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLI 469
Query: 144 VLGLCDGGKVDLAYEL 97
+ GL ++ LA ++
Sbjct: 470 IGGLLRKKELSLACQV 485
Score = 73.6 bits (179), Expect = 6e-11
Identities = 54/221 (24%), Positives = 88/221 (39%), Gaps = 35/221 (15%)
Frame = -1
Query: 654 KSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDTINPKGFS---- 487
+ L++ A++ FDEM G + Y I+ L ++D A ++ + KG S
Sbjct: 126 RENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMK 185
Query: 486 -------------------------------LNTFTYSRFLSGLCKFKDFEIIQKLLKDM 400
N ++ +SG CK + M
Sbjct: 186 ACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFM 245
Query: 399 DRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRL 220
+ G PD+ NI L C ++++A + ++ M G EPD+ SY ++ GLCKA RL
Sbjct: 246 SKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRL 305
Query: 219 DAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVDLAYEL 97
D A ++ M KG+ D + ++ LC AY L
Sbjct: 306 DKAYKLMNTMWEKGLC-DTVSYNTVIGALCKSFATRKAYRL 345
Score = 73.2 bits (178), Expect = 8e-11
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 34/263 (12%)
Frame = -1
Query: 717 DMHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSR 538
+M + + L + + + KSG I +A+ + M++ GC I YN ++
Sbjct: 210 EMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNILLNFFCDGLM 269
Query: 537 FDLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLL----------------- 409
+LA + G + ++Y++ L GLCK + KL+
Sbjct: 270 LELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTVSYNTV 329
Query: 408 -----------------KDMDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGR 280
++M + PD+ + E +A +LQ M +
Sbjct: 330 IGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVL 389
Query: 279 EPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVDLAYE 100
PD++ YT V+ CK R+++ A +++ M+ GI PD + AL+ GLC KV A
Sbjct: 390 IPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAM- 448
Query: 99 LTLGVMKVELSLAHQFTMCLLVG 31
L M++ + T L++G
Sbjct: 449 LLYEEMQIRGCYPDEVTFKLIIG 471
Score = 65.1 bits (157), Expect = 2e-08
Identities = 43/182 (23%), Positives = 81/182 (44%)
Frame = -1
Query: 687 LSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDT 508
+SY KS +A ++F+EM Q + +I + + +A+ T
Sbjct: 324 VSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQT 383
Query: 507 INPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENL 328
+ + Y+ + CK + E+ Q + +DM +G PD+ + N + LC +
Sbjct: 384 MTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASK 443
Query: 327 VDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRA 148
V A+ + + M +G PD V++ ++I GL + + L A ++W M+ KG D
Sbjct: 444 VSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSET 503
Query: 147 LV 142
L+
Sbjct: 504 LI 505
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 248 bits (632), Expect(2) = 9e-69
Identities = 125/220 (56%), Positives = 160/220 (72%), Gaps = 3/220 (1%)
Frame = -1
Query: 714 MHRALGWQRLSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRF 535
MH+ LG RL+YR++ N VKSG+ID AVQVFDEM S RVFS DYNR IGVL+ +SRF
Sbjct: 1 MHQTLGAVRLAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRF 60
Query: 534 DLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIY 355
+LAE Y + P GFSL FTYSRF+SGLCK K FE+I LL+DM+ LG +PD+WA NIY
Sbjct: 61 ELAEAIYRDMMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIY 120
Query: 354 LYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGI 175
L LLC EN V A++ M ++GREPD+VSYTI+I+GL +A ++ AV +W M+ G+
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 174 VPDDRACRALVLGLCDGGKVDLAYELTLGVMK---VELSL 64
PD++AC ALV+GLC KVDLAYE+ +K V+LS+
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSI 220
Score = 39.7 bits (91), Expect(2) = 9e-69
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = -3
Query: 76 RVKFSTSIYNVLISGFCCAGRIDKA 2
RVK S +YN LISGFC AGRI+KA
Sbjct: 215 RVKLSIVVYNALISGFCKAGRIEKA 239
Score = 78.2 bits (191), Expect = 2e-12
Identities = 45/162 (27%), Positives = 76/162 (46%)
Frame = -1
Query: 582 IDYNRIIGVLISQSRFDLAEHYYDTINPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKD 403
+ Y+ +I S A ++ + KG N T++ + + + + +KLL
Sbjct: 326 VSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQ 385
Query: 402 MDRLGAVPDMWACNIYLYLLCSENLVDMALEVLQLMAEKGREPDMVSYTIVISGLCKARR 223
M LG PD L LC VD A + M E PD +SY +ISGLC++ R
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 222 LDAAVRMWQIMLGKGIVPDDRACRALVLGLCDGGKVDLAYEL 97
+ A+++++ M GK PD+ + ++ GL K+ AY++
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKV 487
Score = 72.8 bits (177), Expect = 1e-10
Identities = 44/186 (23%), Positives = 82/186 (44%)
Frame = -1
Query: 687 LSYRAKTFNYVKSGLIDQAVQVFDEMTQSGCRVFSIDYNRIIGVLISQSRFDLAEHYYDT 508
+SY + ++ +A ++F+EM Q G + + +I + + +A+ D
Sbjct: 326 VSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQ 385
Query: 507 INPKGFSLNTFTYSRFLSGLCKFKDFEIIQKLLKDMDRLGAVPDMWACNIYLYLLCSENL 328
+ G S + Y+ L LCK + + + DM PD + N + LC
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGR 445
Query: 327 VDMALEVLQLMAEKGREPDMVSYTIVISGLCKARRLDAAVRMWQIMLGKGIVPDDRACRA 148
V A+++ + M K PD +++ +I GL + ++L AA ++W M+ KG D
Sbjct: 446 VTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDT 505
Query: 147 LVLGLC 130
L+ C
Sbjct: 506 LIKASC 511