BLASTX nr result

ID: Panax21_contig00031154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031154
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...   198   3e-49
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...   197   1e-48
ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793...   196   2e-48
gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis mel...   195   3e-48
ref|XP_002329920.1| chromatin remodeling complex subunit [Populu...   193   1e-47

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score =  198 bits (504), Expect = 3e-49
 Identities = 93/107 (86%), Positives = 101/107 (94%)
 Frame = -3

Query: 371  FLSSLYFEFKARLPCLVLVPLSTMPNWMAEFTLWAPDLNVVEYHGSAKARAMIRQYEWHA 192
            FLSSLYFEFKA LPCLVLVPLSTMPNW+AEF+LWAP+LNVVEYHG AKARA+IRQ+EWH 
Sbjct: 796  FLSSLYFEFKATLPCLVLVPLSTMPNWLAEFSLWAPNLNVVEYHGCAKARAIIRQHEWHG 855

Query: 191  SDLSGLSKKTASYKFNVLLTTYEMVLVDSSHLRGVPWEVLVVDEGHR 51
            +D +G +KKTASYKFNVLLTTYEMVL DSSHLRGVPWEVLVVDEGHR
Sbjct: 856  TDPNGSNKKTASYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHR 902


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223537108|gb|EEF38742.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 2257

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/107 (86%), Positives = 99/107 (92%)
 Frame = -3

Query: 371  FLSSLYFEFKARLPCLVLVPLSTMPNWMAEFTLWAPDLNVVEYHGSAKARAMIRQYEWHA 192
            FLSSLYFEF+A LPCLVLVPLSTMPNW+AEF LWAP+LNVVEYHG AKARA+IRQYEWHA
Sbjct: 709  FLSSLYFEFRASLPCLVLVPLSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHA 768

Query: 191  SDLSGLSKKTASYKFNVLLTTYEMVLVDSSHLRGVPWEVLVVDEGHR 51
            SD    ++KTASYKFNVLLTTYEMVL DSSHLRGVPWEVLVVDEGHR
Sbjct: 769  SDPKKTNQKTASYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHR 815


>ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
          Length = 2325

 Score =  196 bits (498), Expect = 2e-48
 Identities = 91/107 (85%), Positives = 100/107 (93%)
 Frame = -3

Query: 371  FLSSLYFEFKARLPCLVLVPLSTMPNWMAEFTLWAPDLNVVEYHGSAKARAMIRQYEWHA 192
            F+SSLYFEFK  LPCLVLVPLSTMPNW+AEF LWAP++NVVEYHG AKARA+IRQYEWHA
Sbjct: 781  FISSLYFEFKVSLPCLVLVPLSTMPNWLAEFELWAPNVNVVEYHGCAKARAIIRQYEWHA 840

Query: 191  SDLSGLSKKTASYKFNVLLTTYEMVLVDSSHLRGVPWEVLVVDEGHR 51
            ++ SGL+KKT +YKFNVLLTTYEMVL DSSHLRGVPWEVLVVDEGHR
Sbjct: 841  NNPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHR 887


>gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
          Length = 2374

 Score =  195 bits (496), Expect = 3e-48
 Identities = 92/107 (85%), Positives = 101/107 (94%)
 Frame = -3

Query: 371  FLSSLYFEFKARLPCLVLVPLSTMPNWMAEFTLWAPDLNVVEYHGSAKARAMIRQYEWHA 192
            F+SSLYFEFKARLPCLVLVPLSTMPNW++EF LWAP+LNVVEYHG AKARA IRQYEWHA
Sbjct: 842  FISSLYFEFKARLPCLVLVPLSTMPNWLSEFALWAPNLNVVEYHGGAKARAAIRQYEWHA 901

Query: 191  SDLSGLSKKTASYKFNVLLTTYEMVLVDSSHLRGVPWEVLVVDEGHR 51
            S+ S L+KKT S+KFNVLLTTYEMVLVD+S+LRGVPWEVLVVDEGHR
Sbjct: 902  SNPSQLNKKTDSFKFNVLLTTYEMVLVDASYLRGVPWEVLVVDEGHR 948


>ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222871157|gb|EEF08288.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2332

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/107 (85%), Positives = 98/107 (91%)
 Frame = -3

Query: 371  FLSSLYFEFKARLPCLVLVPLSTMPNWMAEFTLWAPDLNVVEYHGSAKARAMIRQYEWHA 192
            FLSSLYFEFKA LPCLVLVPLSTMPNW +EF LWAP+LNVVEYHG AKARAMIR YEWHA
Sbjct: 785  FLSSLYFEFKASLPCLVLVPLSTMPNWFSEFALWAPNLNVVEYHGCAKARAMIRLYEWHA 844

Query: 191  SDLSGLSKKTASYKFNVLLTTYEMVLVDSSHLRGVPWEVLVVDEGHR 51
            SD + ++KKT SYKFNVLLTTYEMVL DS++LRGVPWEVLVVDEGHR
Sbjct: 845  SDPNKMNKKTTSYKFNVLLTTYEMVLADSTYLRGVPWEVLVVDEGHR 891


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