BLASTX nr result

ID: Panax21_contig00031122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031122
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]   311   1e-82
ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...   301   1e-79
ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [B...   298   1e-78
gb|ACN27672.1| unknown [Zea mays] gi|413932600|gb|AFW67151.1| hy...   295   8e-78
ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [S...   293   2e-77

>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score =  311 bits (796), Expect = 1e-82
 Identities = 132/177 (74%), Positives = 150/177 (84%), Gaps = 4/177 (2%)
 Frame = -3

Query: 809 RECPNVAVCNNCGLPGHIAAECSSKTMCWNCKEPGHLANQCSNDQICHLCNKTGHLARAC 630
           R+C ++AVCNNCGLPGHIAAEC++KT+CWNCKEPGH+AN+CSN+ +CH CNKTGHLAR C
Sbjct: 56  RDCSHIAVCNNCGLPGHIAAECTAKTLCWNCKEPGHMANECSNEAVCHNCNKTGHLARDC 115

Query: 629 SESS----DPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSNDPVCNLCNVSGHV 462
           S S     D R+CNNC + GHIA DCTN K CNNCRK GHLAREC+NDPVCN+CNVSGHV
Sbjct: 116 SASGLSSFDTRLCNNCHRPGHIAADCTNDKTCNNCRKPGHLARECTNDPVCNVCNVSGHV 175

Query: 461 ARQCPKTTIASQIVGGPFRDIICRNCGQPGHISWDCVSIVICNCCGGLGHIALECPS 291
           ARQCPK+ + S+I GGPFRDIICR C QPGHIS DCV IVICN CGG GH+A ECPS
Sbjct: 176 ARQCPKSNLPSEIHGGPFRDIICRVCNQPGHISRDCVGIVICNTCGGRGHMAYECPS 232



 Score =  127 bits (318), Expect = 4e-27
 Identities = 59/128 (46%), Positives = 77/128 (60%)
 Frame = -3

Query: 680 DQICHLCNKTGHLARACSESSDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSN 501
           D IC  C + GH AR CS  +   VCNNC   GHIA +CT    C NC++ GH+A ECSN
Sbjct: 42  DVICKNCKRPGHFARDCSHIA---VCNNCGLPGHIAAECTAKTLCWNCKEPGHMANECSN 98

Query: 500 DPVCNLCNVSGHVARQCPKTTIASQIVGGPFRDIICRNCGQPGHISWDCVSIVICNCCGG 321
           + VC+ CN +GH+AR C  + ++S      F   +C NC +PGHI+ DC +   CN C  
Sbjct: 99  EAVCHNCNKTGHLARDCSASGLSS------FDTRLCNNCHRPGHIAADCTNDKTCNNCRK 152

Query: 320 LGHIALEC 297
            GH+A EC
Sbjct: 153 PGHLAREC 160



 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 29/108 (26%)
 Frame = -3

Query: 788 VCNNCGLPGHIAAECSSKTMCWNCKEPGHLANQCSNDQICHLCNKTGHLARACSESSDPR 609
           +CNNC  PGHIAA+C++   C NC++PGHLA +C+ND +C++CN +GH+AR C +S+ P 
Sbjct: 127 LCNNCHRPGHIAADCTNDKTCNNCRKPGHLARECTNDPVCNVCNVSGHVARQCPKSNLPS 186

Query: 608 -----------------------------VCNNCFKTGHIAVDCTNGK 552
                                        +CN C   GH+A +C +G+
Sbjct: 187 EIHGGPFRDIICRVCNQPGHISRDCVGIVICNTCGGRGHMAYECPSGR 234



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 548 CNNCRKTGHLARECSNDPVCNLCNVSGHVARQCPKTTIASQIVGGPFRDIICRNCGQPGH 369
           C NC++ GH AR+CS+  VCN C + GH+A +C   T+             C NC +PGH
Sbjct: 45  CKNCKRPGHFARDCSHIAVCNNCGLPGHIAAECTAKTL-------------CWNCKEPGH 91

Query: 368 ISWDCVSIVICNCCGGLGHIALECPSA 288
           ++ +C +  +C+ C   GH+A +C ++
Sbjct: 92  MANECSNEAVCHNCNKTGHLARDCSAS 118


>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
           gi|296086261|emb|CBI31702.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score =  301 bits (771), Expect = 1e-79
 Identities = 129/177 (72%), Positives = 145/177 (81%), Gaps = 4/177 (2%)
 Frame = -3

Query: 809 RECPNVAVCNNCGLPGHIAAECSSKTMCWNCKEPGHLANQCSNDQICHLCNKTGHLARAC 630
           R+CPNV VCNNCGLPGHIAAEC+S TMCWNCKE GHLA+QC ND +CH+C K GHLAR C
Sbjct: 52  RDCPNVTVCNNCGLPGHIAAECNSTTMCWNCKESGHLASQCPNDPVCHMCGKMGHLARDC 111

Query: 629 SE----SSDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSNDPVCNLCNVSGHV 462
           S     + D R+CNNC+K GHIA DCTN KACNNC KTGHLAR+C N+PVCN+CN+SGHV
Sbjct: 112 SSPGLPAHDARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDCLNEPVCNICNISGHV 171

Query: 461 ARQCPKTTIASQIVGGPFRDIICRNCGQPGHISWDCVSIVICNCCGGLGHIALECPS 291
           ARQCPK+ +  +  GGPFRDI C NCGQPGHIS DCVSIVICN CGG GH + ECPS
Sbjct: 172 ARQCPKSRLVPE-TGGPFRDITCHNCGQPGHISRDCVSIVICNNCGGRGHQSFECPS 227



 Score =  123 bits (308), Expect = 5e-26
 Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
 Frame = -3

Query: 680 DQICHLCNKTGHLARACSESSDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSN 501
           D +C+ C + GH AR C   +   VCNNC   GHIA +C +   C NC+++GHLA +C N
Sbjct: 38  DYLCNKCKRPGHFARDCPNVT---VCNNCGLPGHIAAECNSTTMCWNCKESGHLASQCPN 94

Query: 500 DPVCNLCNVSGHVARQCPKTTIASQIVGGPFRDI-ICRNCGQPGHISWDCVSIVICNCCG 324
           DPVC++C   GH+AR C          G P  D  +C NC +PGHI+ DC +   CN C 
Sbjct: 95  DPVCHMCGKMGHLARDCSSP-------GLPAHDARLCNNCYKPGHIAADCTNEKACNNCH 147

Query: 323 GLGHIALEC 297
             GH+A +C
Sbjct: 148 KTGHLARDC 156


>ref|XP_003559236.1| PREDICTED: DNA-binding protein HEXBP-like [Brachypodium distachyon]
          Length = 301

 Score =  298 bits (762), Expect = 1e-78
 Identities = 119/174 (68%), Positives = 150/174 (86%)
 Frame = -3

Query: 809 RECPNVAVCNNCGLPGHIAAECSSKTMCWNCKEPGHLANQCSNDQICHLCNKTGHLARAC 630
           R+CP+ + CNNC LPGH AAEC+SKT+CWNCK+ GH+A +C+N+ +CH C+K+GHLAR C
Sbjct: 118 RDCPSASTCNNCNLPGHFAAECTSKTVCWNCKKSGHIATECTNEALCHTCSKSGHLARDC 177

Query: 629 SESSDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSNDPVCNLCNVSGHVARQC 450
             S   ++CNNCF+ GHIAVDCTN +ACNNCR++GH+AREC+NDPVCNLCNVSGH+AR C
Sbjct: 178 PTSGSAKLCNNCFQPGHIAVDCTNDRACNNCRQSGHIARECTNDPVCNLCNVSGHLARAC 237

Query: 449 PKTTIASQIVGGPFRDIICRNCGQPGHISWDCVSIVICNCCGGLGHIALECPSA 288
           PKTT+AS+I GGPFRDI+CR CGQPGHIS +C++ VIC+ CGG GH++ ECPSA
Sbjct: 238 PKTTLASEIHGGPFRDILCRMCGQPGHISRNCMATVICDTCGGRGHMSYECPSA 291



 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 33/90 (36%), Positives = 51/90 (56%)
 Frame = -3

Query: 551 ACNNCRKTGHLARECSNDPVCNLCNVSGHVARQCPKTTIASQIVGGPFRDIICRNCGQPG 372
           +C NCR++GH AR+C +   CN CN+ GH A +C   T             +C NC + G
Sbjct: 106 SCKNCRRSGHFARDCPSASTCNNCNLPGHFAAECTSKT-------------VCWNCKKSG 152

Query: 371 HISWDCVSIVICNCCGGLGHIALECPSAAS 282
           HI+ +C +  +C+ C   GH+A +CP++ S
Sbjct: 153 HIATECTNEALCHTCSKSGHLARDCPTSGS 182


>gb|ACN27672.1| unknown [Zea mays] gi|413932600|gb|AFW67151.1| hypothetical protein
           ZEAMMB73_637389 [Zea mays]
          Length = 256

 Score =  295 bits (755), Expect = 8e-78
 Identities = 124/177 (70%), Positives = 150/177 (84%), Gaps = 3/177 (1%)
 Frame = -3

Query: 809 RECPNVAVCNNCGLPGHIAAECSSKTMCWNCKEPGHLANQCSNDQICHLCNKTGHLARAC 630
           +ECP+   CNNC LPGH AAEC+SKT+CWNCKEPGH+A++C N+ +CH CNKTGHLAR C
Sbjct: 70  KECPSAPTCNNCNLPGHFAAECTSKTVCWNCKEPGHIASECKNEALCHTCNKTGHLARDC 129

Query: 629 SES-SDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSNDPVCNLCNVSGHVARQ 453
             S ++ ++CN CFK+GHIAVDCTN +ACNNCR+ GH+AREC NDPVCNLCNVSGHVAR 
Sbjct: 130 PTSGANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIARECKNDPVCNLCNVSGHVARV 189

Query: 452 CPKTTIASQ--IVGGPFRDIICRNCGQPGHISWDCVSIVICNCCGGLGHIALECPSA 288
           CPKTT+AS+  I GGPFRDI+CR CGQPGHIS +C++ VIC+ CGG GH++ ECPSA
Sbjct: 190 CPKTTLASEIHIQGGPFRDILCRICGQPGHISRNCMATVICDTCGGRGHMSYECPSA 246



 Score =  120 bits (301), Expect = 4e-25
 Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
 Frame = -3

Query: 680 DQICHLCNKTGHLARACSESSDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSN 501
           D +C  C + GH A+ C  +     CNNC   GH A +CT+   C NC++ GH+A EC N
Sbjct: 56  DLVCKNCRRPGHFAKECPSAP---TCNNCNLPGHFAAECTSKTVCWNCKEPGHIASECKN 112

Query: 500 DPVCNLCNVSGHVARQCPKTTIASQIVGGPFR----------DIICRNCGQPGHISWDCV 351
           + +C+ CN +GH+AR CP +    ++    F+          +  C NC QPGHI+ +C 
Sbjct: 113 EALCHTCNKTGHLARDCPTSGANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIARECK 172

Query: 350 SIVICNCCGGLGHIALECP 294
           +  +CN C   GH+A  CP
Sbjct: 173 NDPVCNLCNVSGHVARVCP 191



 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 36/91 (39%), Positives = 53/91 (58%)
 Frame = -3

Query: 548 CNNCRKTGHLARECSNDPVCNLCNVSGHVARQCPKTTIASQIVGGPFRDIICRNCGQPGH 369
           C NCR+ GH A+EC + P CN CN+ GH A +C   T+             C NC +PGH
Sbjct: 59  CKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTSKTV-------------CWNCKEPGH 105

Query: 368 ISWDCVSIVICNCCGGLGHIALECPSAASNV 276
           I+ +C +  +C+ C   GH+A +CP++ +NV
Sbjct: 106 IASECKNEALCHTCNKTGHLARDCPTSGANV 136


>ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
           gi|241917482|gb|EER90626.1| hypothetical protein
           SORBIDRAFT_01g003240 [Sorghum bicolor]
          Length = 258

 Score =  293 bits (751), Expect = 2e-77
 Identities = 120/175 (68%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
 Frame = -3

Query: 809 RECPNVAVCNNCGLPGHIAAECSSKTMCWNCKEPGHLANQCSNDQICHLCNKTGHLARAC 630
           +ECP+   CNNC LPGH AAEC+S+T+CWNCKE GH+A++C N+ +CH CNKTGHLAR C
Sbjct: 74  KECPSAPTCNNCNLPGHFAAECTSQTICWNCKESGHIASECKNEALCHTCNKTGHLARDC 133

Query: 629 SES-SDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSNDPVCNLCNVSGHVARQ 453
             S ++ ++CN CFK GH AVDCTN +ACNNCR+ GH+AREC NDPVCNLCNVSGHVAR 
Sbjct: 134 PTSGANVKLCNKCFKPGHFAVDCTNERACNNCRQPGHIARECKNDPVCNLCNVSGHVARV 193

Query: 452 CPKTTIASQIVGGPFRDIICRNCGQPGHISWDCVSIVICNCCGGLGHIALECPSA 288
           CPKTT+AS+I GGPFRDI+CR CGQPGHIS +C++ +IC+ CGG GH++ ECPSA
Sbjct: 194 CPKTTLASEIQGGPFRDILCRICGQPGHISRNCIATIICDTCGGRGHMSYECPSA 248



 Score =  120 bits (302), Expect = 3e-25
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
 Frame = -3

Query: 680 DQICHLCNKTGHLARACSESSDPRVCNNCFKTGHIAVDCTNGKACNNCRKTGHLARECSN 501
           D +C  C + GH A+ C  +     CNNC   GH A +CT+   C NC+++GH+A EC N
Sbjct: 60  DLVCKNCRRPGHFAKECPSAP---TCNNCNLPGHFAAECTSQTICWNCKESGHIASECKN 116

Query: 500 DPVCNLCNVSGHVARQCPKTTIASQIVGGPFR----------DIICRNCGQPGHISWDCV 351
           + +C+ CN +GH+AR CP +    ++    F+          +  C NC QPGHI+ +C 
Sbjct: 117 EALCHTCNKTGHLARDCPTSGANVKLCNKCFKPGHFAVDCTNERACNNCRQPGHIARECK 176

Query: 350 SIVICNCCGGLGHIALECP 294
           +  +CN C   GH+A  CP
Sbjct: 177 NDPVCNLCNVSGHVARVCP 195



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 36/91 (39%), Positives = 52/91 (57%)
 Frame = -3

Query: 548 CNNCRKTGHLARECSNDPVCNLCNVSGHVARQCPKTTIASQIVGGPFRDIICRNCGQPGH 369
           C NCR+ GH A+EC + P CN CN+ GH A +C   TI             C NC + GH
Sbjct: 63  CKNCRRPGHFAKECPSAPTCNNCNLPGHFAAECTSQTI-------------CWNCKESGH 109

Query: 368 ISWDCVSIVICNCCGGLGHIALECPSAASNV 276
           I+ +C +  +C+ C   GH+A +CP++ +NV
Sbjct: 110 IASECKNEALCHTCNKTGHLARDCPTSGANV 140


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