BLASTX nr result

ID: Panax21_contig00031115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031115
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|XP_002510726.1| DNA binding protein, putative [Ricinus commu...    80   1e-13
ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263...    79   3e-13
ref|XP_002300624.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]    77   1e-12

>ref|XP_002307818.1| predicted protein [Populus trichocarpa] gi|222857267|gb|EEE94814.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = +2

Query: 2   ATVPNSPPSRGTLSESSGGAGSPLNQSTGACNNINPQGMSSMPWK 136
           +T  +SPPSRGTLSESSGG GSPLNQSTGACNN NPQGMSSMPW+
Sbjct: 228 STGVSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPQGMSSMPWE 272


>ref|XP_002510726.1| DNA binding protein, putative [Ricinus communis]
           gi|223551427|gb|EEF52913.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 374

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +2

Query: 5   TVPNSPPSRGTLSESSGGAGSPLNQSTGACNNINPQGMSSMPWK 136
           T P+SPPSRGT SESSGG GSPLNQSTGACNN N QG+SSMPWK
Sbjct: 331 TGPSSPPSRGTFSESSGGPGSPLNQSTGACNNSNLQGISSMPWK 374


>ref|XP_002275328.1| PREDICTED: uncharacterized protein LOC100263332 [Vitis vinifera]
           gi|297745600|emb|CBI40765.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +2

Query: 5   TVPNSPPSRGTLSESSGGAGSPLNQSTGACNNINPQGMSSMPWK 136
           T  +SPPSRGTLSESSGG GSPLNQSTGACNN NP GM+S+PWK
Sbjct: 310 TGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPWK 353


>ref|XP_002300624.1| predicted protein [Populus trichocarpa] gi|222842350|gb|EEE79897.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/45 (82%), Positives = 41/45 (91%)
 Frame = +2

Query: 2   ATVPNSPPSRGTLSESSGGAGSPLNQSTGACNNINPQGMSSMPWK 136
           +T  +SPPSRGTLSESSGG GSPLNQSTGACNN NPQG+S+MPWK
Sbjct: 234 STGVSSPPSRGTLSESSGGPGSPLNQSTGACNN-NPQGISNMPWK 277


>emb|CAN64876.1| hypothetical protein VITISV_030792 [Vitis vinifera]
          Length = 390

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +2

Query: 5   TVPNSPPSRGTLSESSGGAGSPLNQSTGACNNINPQGMSSMPW 133
           T  +SPPSRGTLSESSGG GSPLNQSTGACNN NP GM+S+PW
Sbjct: 310 TGTSSPPSRGTLSESSGGPGSPLNQSTGACNNSNPPGMTSIPW 352


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