BLASTX nr result
ID: Panax21_contig00031105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00031105
(753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30660.3| unnamed protein product [Vitis vinifera] 328 7e-88
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi... 328 7e-88
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera] 325 8e-87
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2... 319 5e-85
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,... 310 2e-82
>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 328 bits (841), Expect = 7e-88
Identities = 166/252 (65%), Positives = 195/252 (77%), Gaps = 2/252 (0%)
Frame = -1
Query: 750 YFNSDHPSHGQKIHSHXXXXXXXXXXXXXXXXXXXXXXXXXXSYARQVFDQLAQPTLSAY 571
Y NSD PSHGQKIHSH YARQ+FD++ QPTLSAY
Sbjct: 52 YINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAY 111
Query: 570 NYMLSGYVKAGKFEESFNLVRRLALCDENPDGFTFSMILKAS--TSNGVLLMSRSIGKQV 397
NYM+SGY+K G+ EE NLV RL E PDGFTFSMILKA+ S G+ ++ S+GK V
Sbjct: 112 NYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLGKVV 171
Query: 396 HAQIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFV 217
HAQI++S+ E+DDVLYTALVDSYVK+G+V YARRVFD+M +KNV+CSTSMISGYM QG V
Sbjct: 172 HAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQGSV 231
Query: 216 EDAEDIFKKTIEKDVVVFNAMIEGYSKSVETGKRALYVYIDMQRFDFRPTISTFASILGA 37
EDAEDIFK+T+EKDVVVFNAMIEGYSKSVET +R+L VYIDMQR +FRPT+STFAS++GA
Sbjct: 232 EDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGA 291
Query: 36 CSVLSAFEIGQQ 1
CSVL+ FEIGQQ
Sbjct: 292 CSVLTVFEIGQQ 303
Score = 76.3 bits (186), Expect = 7e-12
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Frame = -1
Query: 621 YARQVFDQLAQPTLSAYNYMLSGYVKAGKFEESFNLVRRLALCDE--------------- 487
YAR+VFD + + M+SGY+ G E++ ++ +R D
Sbjct: 202 YARRVFDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVE 261
Query: 486 -----------------NPDGFTFSMILKASTSNGVLLMSRSIGKQVHAQIVKSDAEADD 358
P TF+ ++ A + +L IG+QV +Q+VK + D
Sbjct: 262 TARRSLEVYIDMQRLNFRPTMSTFASVIGACS----VLTVFEIGQQVQSQLVKMNFYNDI 317
Query: 357 VLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFVEDAEDIFKK 190
+ +AL+D Y K GR++ ARRVFD M EKNV TSMI GY + G +A ++F +
Sbjct: 318 KMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSR 373
>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial [Vitis vinifera]
Length = 533
Score = 328 bits (841), Expect = 7e-88
Identities = 166/252 (65%), Positives = 195/252 (77%), Gaps = 2/252 (0%)
Frame = -1
Query: 750 YFNSDHPSHGQKIHSHXXXXXXXXXXXXXXXXXXXXXXXXXXSYARQVFDQLAQPTLSAY 571
Y NSD PSHGQKIHSH YARQ+FD++ QPTLSAY
Sbjct: 52 YINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAY 111
Query: 570 NYMLSGYVKAGKFEESFNLVRRLALCDENPDGFTFSMILKAS--TSNGVLLMSRSIGKQV 397
NYM+SGY+K G+ EE NLV RL E PDGFTFSMILKA+ S G+ ++ S+GK V
Sbjct: 112 NYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLGKVV 171
Query: 396 HAQIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFV 217
HAQI++S+ E+DDVLYTALVDSYVK+G+V YARRVFD+M +KNV+CSTSMISGYM QG V
Sbjct: 172 HAQILRSNVESDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQGSV 231
Query: 216 EDAEDIFKKTIEKDVVVFNAMIEGYSKSVETGKRALYVYIDMQRFDFRPTISTFASILGA 37
EDAEDIFK+T+EKDVVVFNAMIEGYSKSVET +R+L VYIDMQR +FRPT+STFAS++GA
Sbjct: 232 EDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGA 291
Query: 36 CSVLSAFEIGQQ 1
CSVL+ FEIGQQ
Sbjct: 292 CSVLTVFEIGQQ 303
Score = 76.3 bits (186), Expect = 7e-12
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Frame = -1
Query: 621 YARQVFDQLAQPTLSAYNYMLSGYVKAGKFEESFNLVRRLALCDE--------------- 487
YAR+VFD + + M+SGY+ G E++ ++ +R D
Sbjct: 202 YARRVFDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVE 261
Query: 486 -----------------NPDGFTFSMILKASTSNGVLLMSRSIGKQVHAQIVKSDAEADD 358
P TF+ ++ A + +L IG+QV +Q+VK + D
Sbjct: 262 TARRSLEVYIDMQRLNFRPTMSTFASVIGACS----VLTVFEIGQQVQSQLVKMNFYNDI 317
Query: 357 VLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFVEDAEDIFKK 190
+ +AL+D Y K GR++ ARRVFD M EKNV TSMI GY + G +A ++F +
Sbjct: 318 KMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSR 373
>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
Length = 504
Score = 325 bits (832), Expect = 8e-87
Identities = 165/252 (65%), Positives = 193/252 (76%), Gaps = 2/252 (0%)
Frame = -1
Query: 750 YFNSDHPSHGQKIHSHXXXXXXXXXXXXXXXXXXXXXXXXXXSYARQVFDQLAQPTLSAY 571
Y NSD PSHGQKIHSH YARQ+FD++ QPTLSAY
Sbjct: 52 YINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCLRYARQLFDEMHQPTLSAY 111
Query: 570 NYMLSGYVKAGKFEESFNLVRRLALCDENPDGFTFSMILKAS--TSNGVLLMSRSIGKQV 397
NYM+SGY+K G+ EE NLV RL E PDGFTFSMILKA+ S G+ ++ S+GK V
Sbjct: 112 NYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTFSMILKATGCASGGIFPLTYSLGKVV 171
Query: 396 HAQIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFV 217
HAQI++S+ E DDVLYTALVDSYVK+G+V YARRVFD+M +KNV+CSTSMISGYM QG V
Sbjct: 172 HAQILRSNVEXDDVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQGSV 231
Query: 216 EDAEDIFKKTIEKDVVVFNAMIEGYSKSVETGKRALYVYIDMQRFDFRPTISTFASILGA 37
EDAEDIFK+T+EKDVVVFNAMIEGYSKSVET +R+L VYIDMQR +FRPT+STFAS++GA
Sbjct: 232 EDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGA 291
Query: 36 CSVLSAFEIGQQ 1
CSVL+ EIGQQ
Sbjct: 292 CSVLTVXEIGQQ 303
Score = 78.2 bits (191), Expect = 2e-12
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 32/176 (18%)
Frame = -1
Query: 621 YARQVFDQLAQPTLSAYNYMLSGYVKAGKFEESFNLVRRLALCDE--------------- 487
YAR+VFD + + M+SGY+ G E++ ++ +R D
Sbjct: 202 YARRVFDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVE 261
Query: 486 -----------------NPDGFTFSMILKASTSNGVLLMSRSIGKQVHAQIVKSDAEADD 358
P TF+ ++ A + +L IG+QV +Q+VK + D
Sbjct: 262 TARRSLEVYIDMQRLNFRPTMSTFASVIGACS----VLTVXEIGQQVQSQLVKMBFYNDI 317
Query: 357 VLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFVEDAEDIFKK 190
+ +AL+D Y K GR++ ARRVFD M EKNV TSMI GY + G +A ++F +
Sbjct: 318 KMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMIDGYGKNGNSNEALELFSR 373
>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
predicted protein [Populus trichocarpa]
Length = 530
Score = 319 bits (817), Expect = 5e-85
Identities = 163/250 (65%), Positives = 187/250 (74%)
Frame = -1
Query: 750 YFNSDHPSHGQKIHSHXXXXXXXXXXXXXXXXXXXXXXXXXXSYARQVFDQLAQPTLSAY 571
Y NSD P HGQKIH+H YA Q+FD+L Q TLSAY
Sbjct: 52 YINSDTPFHGQKIHTHILKTGFRPNINISIKLLILHLKCRCLKYAHQLFDELPQRTLSAY 111
Query: 570 NYMLSGYVKAGKFEESFNLVRRLALCDENPDGFTFSMILKASTSNGVLLMSRSIGKQVHA 391
NYM+ GY++ G FEES ++VRRL L E PDGFTFSMILKASTS +++ R+ G VHA
Sbjct: 112 NYMIGGYLRQGLFEESISMVRRLDLDGERPDGFTFSMILKASTSGANVMLPRNTGGLVHA 171
Query: 390 QIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFVED 211
QI+K D +ADDVLYTALVDSYVKSG+V YAR+VFDLM EKNV+CSTSMISGYM QGFVED
Sbjct: 172 QILKLDVKADDVLYTALVDSYVKSGKVGYARKVFDLMLEKNVICSTSMISGYMNQGFVED 231
Query: 210 AEDIFKKTIEKDVVVFNAMIEGYSKSVETGKRALYVYIDMQRFDFRPTISTFASILGACS 31
AE+IF KT+EKD+VVFNAMIEGYSKSVET +AL VY+DMQRF RP STFAS+ GACS
Sbjct: 232 AEEIFWKTVEKDIVVFNAMIEGYSKSVETAMKALEVYVDMQRFGLRPNGSTFASVSGACS 291
Query: 30 VLSAFEIGQQ 1
VL+ FEIGQQ
Sbjct: 292 VLAGFEIGQQ 301
Score = 72.0 bits (175), Expect = 1e-10
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Frame = -1
Query: 618 ARQVFDQLAQPTLSAYNYMLSGYVK----AGKFEESFNLVRRLALCDENPDGFTFSMILK 451
A ++F + + + +N M+ GY K A K E + ++R L P+G TF+ +
Sbjct: 232 AEEIFWKTVEKDIVVFNAMIEGYSKSVETAMKALEVYVDMQRFGL---RPNGSTFASVSG 288
Query: 450 ASTSNGVLLMSRSIGKQVHAQIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEK 271
A + +L IG+QV Q++KS + +AL+D Y K GR++ ARRVF+ M +
Sbjct: 289 ACS----VLAGFEIGQQVQCQLMKSGFFNGVKMGSALIDMYSKCGRIEDARRVFNYMPVR 344
Query: 270 NVVCSTSMISGYMEQGFVEDAEDIFKK----TIEKDVVVFNAMIE--GYSKSVETGKRAL 109
NV TSMI GY + G +A ++F + IE + V F + G++ V G+
Sbjct: 345 NVFSWTSMIDGYGKNGEPWEALELFHRMQQCNIEPNYVTFLGALSACGHAGLVTKGRE-- 402
Query: 108 YVYIDMQR-FDFRPTISTFASIL 43
++ M+R + +P + +A ++
Sbjct: 403 -IFDSMERDYSTKPRMEHYACMV 424
>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 530
Score = 310 bits (795), Expect = 2e-82
Identities = 154/250 (61%), Positives = 190/250 (76%)
Frame = -1
Query: 750 YFNSDHPSHGQKIHSHXXXXXXXXXXXXXXXXXXXXXXXXXXSYARQVFDQLAQPTLSAY 571
+ NS+ P HGQKIH+H YARQ+FD+L Q TLSAY
Sbjct: 52 HINSNTPFHGQKIHAHIVKTGFIPNTNVSIKLLILYLKCGCLKYARQMFDELPQRTLSAY 111
Query: 570 NYMLSGYVKAGKFEESFNLVRRLALCDENPDGFTFSMILKASTSNGVLLMSRSIGKQVHA 391
NY++ GY+K G ++S NLVRRL L + PDGFT+SMILKASTS + +S ++G VH
Sbjct: 112 NYLIGGYLKLGLVQDSMNLVRRLVLEGQRPDGFTYSMILKASTSGDNVTLSCNLGSVVHG 171
Query: 390 QIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEKNVVCSTSMISGYMEQGFVED 211
QI+KS+ E DDVLYTALVDSYVKSGRV YAR+VFD+M EKNV+CSTSMISGYM +G VED
Sbjct: 172 QILKSEVEPDDVLYTALVDSYVKSGRVGYARKVFDMMMEKNVICSTSMISGYMNRGSVED 231
Query: 210 AEDIFKKTIEKDVVVFNAMIEGYSKSVETGKRALYVYIDMQRFDFRPTISTFASILGACS 31
AE+IF++T+EKDVVVFNAMIEGYSKSV+T ++AL VY++MQR+ FRP +STFAS++GACS
Sbjct: 232 AEEIFERTVEKDVVVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACS 291
Query: 30 VLSAFEIGQQ 1
VL+ FEIGQQ
Sbjct: 292 VLAGFEIGQQ 301
Score = 74.7 bits (182), Expect = 2e-11
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 8/200 (4%)
Frame = -1
Query: 618 ARQVFDQLAQPTLSAYNYMLSGYVKAGKF-EESFNLVRRLALCDENPDGFTFSMILKAST 442
A ++F++ + + +N M+ GY K+ + E++ + + P+ TF+ ++ A +
Sbjct: 232 AEEIFERTVEKDVVVFNAMIEGYSKSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACS 291
Query: 441 SNGVLLMSRSIGKQVHAQIVKSDAEADDVLYTALVDSYVKSGRVDYARRVFDLMFEKNVV 262
+L IG+QV Q++K + + +AL+D Y K GR++ ARR F+ M EKNV
Sbjct: 292 ----VLAGFEIGQQVQGQLLKREFFTNVKTGSALIDMYSKCGRIEDARRAFEQMPEKNVF 347
Query: 261 CSTSMISGYMEQGFVEDAEDIFKK----TIEKDVVVFNAMIE--GYSKSVETGKRALYVY 100
+SMI GY + G ++A +F K IE + V F + G++ V G+ ++
Sbjct: 348 SWSSMIDGYGKNGRPDEALQLFHKMQDCCIEPNYVTFLGALSACGHAGLVSKGRE---IF 404
Query: 99 IDMQR-FDFRPTISTFASIL 43
M+R + +P + +A ++
Sbjct: 405 ESMEREYSLKPGMEHYACMV 424