BLASTX nr result

ID: Panax21_contig00031099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031099
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170335.1| PREDICTED: ribosome biogenesis protein BRX1 ...    67   1e-09
ref|XP_002529740.1| ribosome biogenesis protein brix, putative [...    66   3e-09
ref|XP_002329145.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002317510.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003552625.1| PREDICTED: ribosome biogenesis protein BRX1-...    64   1e-08

>ref|XP_004170335.1| PREDICTED: ribosome biogenesis protein BRX1 homolog, partial
           [Cucumis sativus]
          Length = 252

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 211 FECRKHKDLYLWMAKCPSGPSVKFLVNAV 125
           FECRKHKDLYLWMAKCPSGPSVKFLVNAV
Sbjct: 49  FECRKHKDLYLWMAKCPSGPSVKFLVNAV 77


>ref|XP_002529740.1| ribosome biogenesis protein brix, putative [Ricinus communis]
           gi|223530781|gb|EEF32647.1| ribosome biogenesis protein
           brix, putative [Ricinus communis]
          Length = 312

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 211 FECRKHKDLYLWMAKCPSGPSVKFLVNAV 125
           FECRKHKDLYLWMAKCP GPSVKFLVNAV
Sbjct: 110 FECRKHKDLYLWMAKCPGGPSVKFLVNAV 138


>ref|XP_002329145.1| predicted protein [Populus trichocarpa] gi|222869814|gb|EEF06945.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 211 FECRKHKDLYLWMAKCPSGPSVKFLVNAV 125
           FECRKHKDLYLWM KCPSGPSVKFLVNAV
Sbjct: 115 FECRKHKDLYLWMVKCPSGPSVKFLVNAV 143


>ref|XP_002317510.1| predicted protein [Populus trichocarpa] gi|222860575|gb|EEE98122.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 28/29 (96%), Positives = 28/29 (96%)
 Frame = -3

Query: 211 FECRKHKDLYLWMAKCPSGPSVKFLVNAV 125
           FECRKHKDLYLWM KCPSGPSVKFLVNAV
Sbjct: 115 FECRKHKDLYLWMVKCPSGPSVKFLVNAV 143


>ref|XP_003552625.1| PREDICTED: ribosome biogenesis protein BRX1-like [Glycine max]
          Length = 316

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = -3

Query: 211 FECRKHKDLYLWMAKCPSGPSVKFLVNAV 125
           FECRKHKDLYLWMAKCP+GPSVKFLV+AV
Sbjct: 114 FECRKHKDLYLWMAKCPNGPSVKFLVSAV 142


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