BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031095
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    86   3e-15
gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    84   2e-14
gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana] gi|...    82   5e-14
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                81   8e-14
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          81   8e-14

>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/127 (40%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
 Frame = -3

Query: 431 DMKRMMVDNGSSVDILYAHAYQRM-HLDGRKMEIGQEAPLYGFSNDPVKVAGTIELPVIF 255
           ++  +MVD GSSVD+L+  A++R  HLD +    G++ PL GF+ D     GTI+LP I 
Sbjct: 75  ELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQ--GRKTPLTGFAGDTTFSIGTIQLPTI- 131

Query: 254 GTAPQQVEIICKFYVVHVDSAYNAILGRPTLIALQAVTSIPHFKIKFPTAHGVGEVKGDL 75
               + V  +  F VV   + +NAILGRP L  ++AV S  H  IKFP+  G+  V G  
Sbjct: 132 ---ARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKAVPSTYHQCIKFPSYKGIAVVYGSQ 188

Query: 74  DLARRCY 54
             +R+CY
Sbjct: 189 RSSRKCY 195


>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/126 (35%), Positives = 76/126 (60%)
 Frame = -3

Query: 431 DMKRMMVDNGSSVDILYAHAYQRMHLDGRKMEIGQEAPLYGFSNDPVKVAGTIELPVIFG 252
           ++ R+++D GSSVD+++    ++M +  R   +G  +PL  F+++     GTI+LPV+  
Sbjct: 543 EVSRILIDTGSSVDLIFLSTLEKMGIS-RGDIVGPPSPLVAFTSESAMSLGTIKLPVL-- 599

Query: 251 TAPQQVEIICKFYVVHVDSAYNAILGRPTLIALQAVTSIPHFKIKFPTAHGVGEVKGDLD 72
              ++V  I  F V    +AYN ILG P +  ++AV S  +  IKFPT++GV  ++GD +
Sbjct: 600 --AKKVSKIVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIRGDQE 657

Query: 71  LARRCY 54
            +R CY
Sbjct: 658 ASRTCY 663


>gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
           gi|7267161|emb|CAB77873.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 681

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
 Frame = -3

Query: 431 DMKRMMVDNGSSVDILYAHAYQRM-HLDGRKMEIGQEAPLYGFSNDPVKVAGTIELPVIF 255
           ++  +M+D GSSVD+L+  A++RM HLD      G++ PL GF+ D     GTI+LP I 
Sbjct: 549 ELSHIMIDTGSSVDVLFYDAFKRMGHLDSELQ--GRKTPLTGFAGDTTFSLGTIQLPTI- 605

Query: 254 GTAPQQVEIICKFYVVHVDSAYNAILGRPTLIALQAVTSIPHFKIKFPTAHGVGEV 87
               + V  +  F VV+  + +NAILGRP L A++AV S  H  IKFP+  G+  V
Sbjct: 606 ---ARGVRRLTSFLVVNKKAPFNAILGRPWLHAMKAVPSTYHQCIKFPSDKGIAVV 658


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/124 (35%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
 Frame = -3

Query: 422  RMMVDNGSSVDILYAHAYQRMHLDGRKMEIGQEAPLYGFSNDPVKVAGTIELPVIFGTAP 243
            +++VD GSSVDILY   +++M +   +++   E  + GFS + V   G I+L   FG   
Sbjct: 653  KVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQ-IVGFSRERVDTKGFIDLYTTFGDDY 711

Query: 242  QQVEIICKFYVVHVDSAYNAILGRPTLIALQAVTSIPHFKIKFPTAHG-VGEVKGDLDLA 66
                I  ++ +V+ +++YN +LGRP++  L+A+ S PH  +KFP+ +G +  V  D   A
Sbjct: 712  LSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVNGDIATVHIDQKTA 771

Query: 65   RRCY 54
            R CY
Sbjct: 772  RECY 775


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/144 (32%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
 Frame = -3

Query: 428 MKRMMVDNGSSVDILYAHAYQRMHLDGRKME--IGQEAPLYGFSNDPVKVAGTIELPVIF 255
           + R+++D GSSVD+++   +  +   G K+E  + +  PL GF     +  G+I L + +
Sbjct: 499 VSRVLIDTGSSVDVMFLPTFLAL---GLKIEQIVPETTPLVGFDGSTSETLGSIPLLMSW 555

Query: 254 GTAPQQVEIICKFYVVH-VDSAYNAILGRPTLIALQAVTSIPHFKIKFPTAHGVGEVKGD 78
           G    +     +F++++ +   YN I GRP+L   +AV S+ H K+KFP  +G+GEVKG+
Sbjct: 556 GRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVKFPANNGIGEVKGN 615

Query: 77  LDLARRCYRN--AVITSGVGVSKQ 12
              AR C  N  A I  G  ++++
Sbjct: 616 QARARECRLNTMAAIEEGGDINEK 639