BLASTX nr result

ID: Panax21_contig00031093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031093
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_087009.1| Ycf2 [Panax ginseng] gi|52220874|ref|YP_087028....   243   1e-62
ref|YP_004935596.1| ycf2 (chloroplast) [Eleutherococcus senticos...   239   1e-61
gb|AEK78268.1| hypothetical chloroplast RF2 [Rhabdodendron amazo...   239   1e-61
gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]    239   1e-61
gb|AEK71475.1| hypothetical chloroplast RF2 [Eucryphia lucida]        239   1e-61

>ref|YP_087009.1| Ycf2 [Panax ginseng] gi|52220874|ref|YP_087028.1| Ycf2 [Panax
            ginseng] gi|68053092|sp|Q68RU4.1|YCF2_PANGI RecName:
            Full=Protein ycf2 gi|51235356|gb|AAT98552.1| ycf2 protein
            [Panax ginseng] gi|51235377|gb|AAT98573.1| ycf2 protein
            [Panax ginseng]
          Length = 2110

 Score =  243 bits (620), Expect = 1e-62
 Identities = 120/122 (98%), Positives = 120/122 (98%)
 Frame = +3

Query: 3    GYQMIEQPGAIYLRDLVDIHKKYLMNSEFNTSCLAERRIFLAHYQTITYSQTSCGANSLN 182
            GYQMIEQPGAIYLR LVDIHKKYLMN EFNTSCLAERRIFLAHYQTITYSQTSCGANSLN
Sbjct: 1359 GYQMIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSLN 1418

Query: 183  FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 362
            FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG
Sbjct: 1419 FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 1478

Query: 363  FL 368
            FL
Sbjct: 1479 FL 1480


>ref|YP_004935596.1| ycf2 (chloroplast) [Eleutherococcus senticosus]
            gi|359422205|ref|YP_004935615.1| ycf2 (chloroplast)
            [Eleutherococcus senticosus] gi|347448251|gb|AEO92663.1|
            ycf2 (chloroplast) [Eleutherococcus senticosus]
            gi|347448268|gb|AEO92680.1| ycf2 (chloroplast)
            [Eleutherococcus senticosus]
          Length = 2121

 Score =  239 bits (611), Expect = 1e-61
 Identities = 118/122 (96%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    GYQMIEQPGAIYLRDLVDIHKKYLMNSEFNTSCLAERRIFLAHYQTITYSQTSCGANSLN 182
            GYQMIEQPGAIYLR LVDIHKKYLMN EFNTSCLAERRIFLAHYQTITYSQTSCGANS +
Sbjct: 1369 GYQMIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFH 1428

Query: 183  FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 362
            FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG
Sbjct: 1429 FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 1488

Query: 363  FL 368
            FL
Sbjct: 1489 FL 1490


>gb|AEK78268.1| hypothetical chloroplast RF2 [Rhabdodendron amazonicum]
          Length = 2288

 Score =  239 bits (611), Expect = 1e-61
 Identities = 118/122 (96%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    GYQMIEQPGAIYLRDLVDIHKKYLMNSEFNTSCLAERRIFLAHYQTITYSQTSCGANSLN 182
            GYQMIEQPGAIYLR LVDIHKKYLMN EFNTSCLAERRIFLAHYQTITYSQTSCGANS +
Sbjct: 1562 GYQMIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFH 1621

Query: 183  FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 362
            FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG
Sbjct: 1622 FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 1681

Query: 363  FL 368
            FL
Sbjct: 1682 FL 1683


>gb|AEK71846.1| hypothetical chloroplast RF2 [Aextoxicon punctatum]
          Length = 2316

 Score =  239 bits (611), Expect = 1e-61
 Identities = 118/122 (96%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    GYQMIEQPGAIYLRDLVDIHKKYLMNSEFNTSCLAERRIFLAHYQTITYSQTSCGANSLN 182
            GYQMIEQPGAIYLR LVDIHKKYLMN EFNTSCLAERRIFLAHYQTITYSQTSCGANS +
Sbjct: 1559 GYQMIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFH 1618

Query: 183  FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 362
            FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG
Sbjct: 1619 FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 1678

Query: 363  FL 368
            FL
Sbjct: 1679 FL 1680


>gb|AEK71475.1| hypothetical chloroplast RF2 [Eucryphia lucida]
          Length = 2270

 Score =  239 bits (611), Expect = 1e-61
 Identities = 118/122 (96%), Positives = 119/122 (97%)
 Frame = +3

Query: 3    GYQMIEQPGAIYLRDLVDIHKKYLMNSEFNTSCLAERRIFLAHYQTITYSQTSCGANSLN 182
            GYQMIEQPGAIYLR LVDIHKKYLMN EFNTSCLAERRIFLAHYQTITYSQTSCGANS +
Sbjct: 1543 GYQMIEQPGAIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFH 1602

Query: 183  FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 362
            FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG
Sbjct: 1603 FPSHGKPFSLRLALSPSRGILVIGSIGTGRSYLVKYLATNSYVPFITVFLNKFLDNKPKG 1662

Query: 363  FL 368
            FL
Sbjct: 1663 FL 1664


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