BLASTX nr result

ID: Panax21_contig00031057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031057
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arab...    70   3e-10
ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp....    67   2e-09
gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. ...    66   5e-09
gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. ...    66   6e-09
ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp....    65   1e-08

>ref|XP_002863204.1| hypothetical protein ARALYDRAFT_333042 [Arabidopsis lyrata subsp.
            lyrata] gi|297309038|gb|EFH39463.1| hypothetical protein
            ARALYDRAFT_333042 [Arabidopsis lyrata subsp. lyrata]
          Length = 916

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/134 (30%), Positives = 60/134 (44%)
 Frame = +2

Query: 119  LKELNLRDCYMFDGDIPDNIGXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXRSCQNL 298
            LK L L  C + D  +P N+G            N                     SC  L
Sbjct: 708  LKTLRLGSCNLSDELVPKNLGSLSCLEELDLQGNNFRNLQMDFAGLSSLQILKVDSCSEL 767

Query: 299  QSLWELPPKLEKLVATGCRAMTKLVNLSMLKNLKHLDLTNCRSLVEIHGLENLSSIQEIH 478
            QS++ LP +L    A+ C  + +  +LS    L+ L LTNC +LVE  GL+ L ++  IH
Sbjct: 768  QSMFSLPKRLRSFYASNCIMLERTPDLSECSVLQSLHLTNCFNLVETPGLDKLKTVGVIH 827

Query: 479  MGDCNKLTNTFTES 520
            M  CN+++  + ES
Sbjct: 828  MEMCNRISTDYRES 841


>ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339193|gb|EFH69610.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/135 (30%), Positives = 65/135 (48%)
 Frame = +2

Query: 89   LQTSICGLCSLKELNLRDCYMFDGDIPDNIGXXXXXXXXXXXXNXXXXXXXXXXXXXXXX 268
            L  S   L SL+EL+ R  +   G IPD++             N                
Sbjct: 1058 LPNSFSNLSSLEELDARS-WAISGKIPDDLEKLTSMKILNLGNNYFHSLPSSLKGLSNLK 1116

Query: 269  XXXXRSCQNLQSLWELPPKLEKLVATGCRAMTKLVNLSMLKNLKHLDLTNCRSLVEIHGL 448
                  C+ L+ L  LP +LE+L+   C ++  + +LS LK L  L+LTNC  +V+I GL
Sbjct: 1117 KLSLYDCRELKCLPPLPWRLEQLILANCFSLESISDLSNLKFLDELNLTNCEKVVDILGL 1176

Query: 449  ENLSSIQEIHMGDCN 493
            E+L++++ ++M  CN
Sbjct: 1177 EHLTALKRLYMSGCN 1191


>gb|ACP30564.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1084

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 41/134 (30%), Positives = 58/134 (43%)
 Frame = +2

Query: 98   SICGLCSLKELNLRDCYMFDGDIPDNIGXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXX 277
            S+ GL  L+ L L  C + D  +P N+G            N                   
Sbjct: 716  SLNGLICLRTLRLGYCNLSDELVPVNLGSLSSLEELDLQGNNFRNLQTDFAGLPSLQILK 775

Query: 278  XRSCQNLQSLWELPPKLEKLVATGCRAMTKLVNLSMLKNLKHLDLTNCRSLVEIHGLENL 457
              +C  L+S++ LP KL  L A  C  + +  +L     L+ L LTNC +LVE  GLE L
Sbjct: 776  LDNCSELRSMFSLPKKLRSLYARNCTVLERTPDLKECSVLQSLHLTNCYNLVETPGLEEL 835

Query: 458  SSIQEIHMGDCNKL 499
             ++  IHM  CN +
Sbjct: 836  KTVGVIHMEMCNNV 849


>gb|ACP30614.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 1309

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
 Frame = +2

Query: 8    NLEILALPALTRRSLLLHSP-FHDVAGFLQT--SICGLCSLKELNLRDCYMFDGDIPDNI 178
            NL  L +  + ++ L   SP   +   F++   S   L SL+E++ +   ++ G +PD++
Sbjct: 901  NLSNLRVLKILKKPLFRSSPGTSEEPSFVEVPNSFSNLLSLEEIDAKGWGIW-GKVPDDL 959

Query: 179  GXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXRSCQNLQSLWELPPKLEKLVATGCRA 358
            G            N                      CQ L+ L  LP KLEKL    C A
Sbjct: 960  GKLSSLKKLELGNNYFHSLPSSLEGLWNLKLFTLYDCQELKCLPPLPWKLEKLNLANCFA 1019

Query: 359  MTKLVNLSMLKNLKHLDLTNCRSLVEIHGLENLSSIQEIHMGDCN 493
            +  + +LS L+ L+ L+LTNC  + ++ GLE+L +++ ++M  CN
Sbjct: 1020 LESIADLSKLEILEELNLTNCGKVDDVPGLEHLKALKRLYMSGCN 1064


>ref|XP_002893348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339190|gb|EFH69607.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1488

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 43/147 (29%), Positives = 68/147 (46%)
 Frame = +2

Query: 89   LQTSICGLCSLKELNLRDCYMFDGDIPDNIGXXXXXXXXXXXXNXXXXXXXXXXXXXXXX 268
            L  S   L SL+EL+ R  +   G + D++             N                
Sbjct: 1155 LPHSFSNLLSLEELDARS-WRISGKMRDDLEKLSSLMILNLGNNYFHSLPSSLVGLSNLK 1213

Query: 269  XXXXRSCQNLQSLWELPPKLEKLVATGCRAMTKLVNLSMLKNLKHLDLTNCRSLVEIHGL 448
                  C+ L+ L  LP KLE+L    C ++  + +LS LK L  L+LTNC  +V+I GL
Sbjct: 1214 ELLLCDCRELKGLPPLPWKLEQLNLENCFSLDSIFDLSKLKILHELNLTNCVKVVDIPGL 1273

Query: 449  ENLSSIQEIHMGDCNKLTNTFTESFFH 529
            E+L+++++++M  CN   +   E F H
Sbjct: 1274 EHLTALKKLYMSGCNSSCSFPREDFIH 1300


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