BLASTX nr result

ID: Panax21_contig00031043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031043
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB93075.1| transmembrane protein 50a, putative [Jatropha cur...   140   9e-32
ref|XP_002302262.1| predicted protein [Populus trichocarpa] gi|2...   140   9e-32
ref|XP_002285830.1| PREDICTED: transmembrane protein 50 homolog ...   140   1e-31
ref|NP_564477.1| uncharacterized protein [Arabidopsis thaliana] ...   139   3e-31
ref|XP_004140320.1| PREDICTED: transmembrane protein 50 homolog ...   138   6e-31

>gb|ADB93075.1| transmembrane protein 50a, putative [Jatropha curcas]
          Length = 135

 Score =  140 bits (354), Expect = 9e-32
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = +3

Query: 3   DIDYSPYEEGEWRLKLWLFLAYVVSFISLATSVGLLIQDALVESGPSAWTGTAGVFQCVF 182
           DIDYSPYEEGEWRLKLWLF AYVVSF+SLA SVGLLIQD++V++GPS WTGTAGV QCVF
Sbjct: 62  DIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCVF 121

Query: 183 VLISGLFYWTSHSE 224
           VLISGL YWTSHSE
Sbjct: 122 VLISGLIYWTSHSE 135


>ref|XP_002302262.1| predicted protein [Populus trichocarpa] gi|222843988|gb|EEE81535.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score =  140 bits (354), Expect = 9e-32
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = +3

Query: 3   DIDYSPYEEGEWRLKLWLFLAYVVSFISLATSVGLLIQDALVESGPSAWTGTAGVFQCVF 182
           DIDYSPYEEGEWRLKLWLF AYVVSF+SLA SVGLLIQD++V++GPS WTGTAGV QCVF
Sbjct: 62  DIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIVKTGPSVWTGTAGVLQCVF 121

Query: 183 VLISGLFYWTSHSE 224
           VLISGL YWTSHSE
Sbjct: 122 VLISGLIYWTSHSE 135


>ref|XP_002285830.1| PREDICTED: transmembrane protein 50 homolog [Vitis vinifera]
           gi|302141881|emb|CBI19084.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/74 (87%), Positives = 68/74 (91%)
 Frame = +3

Query: 3   DIDYSPYEEGEWRLKLWLFLAYVVSFISLATSVGLLIQDALVESGPSAWTGTAGVFQCVF 182
           DIDYSPYEEGEWRLKLWLF AYVVSF+SLA SVGLLIQD+L +SGPS WTGTAGV QCVF
Sbjct: 62  DIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSLEKSGPSVWTGTAGVLQCVF 121

Query: 183 VLISGLFYWTSHSE 224
           VLISGL YWTSHSE
Sbjct: 122 VLISGLIYWTSHSE 135


>ref|NP_564477.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297846688|ref|XP_002891225.1| hypothetical protein
           ARALYDRAFT_314063 [Arabidopsis lyrata subsp. lyrata]
           gi|15292703|gb|AAK92720.1| unknown protein [Arabidopsis
           thaliana] gi|19310689|gb|AAL85075.1| unknown protein
           [Arabidopsis thaliana] gi|297337067|gb|EFH67484.1|
           hypothetical protein ARALYDRAFT_314063 [Arabidopsis
           lyrata subsp. lyrata] gi|332193763|gb|AEE31884.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 135

 Score =  139 bits (350), Expect = 3e-31
 Identities = 62/74 (83%), Positives = 70/74 (94%)
 Frame = +3

Query: 3   DIDYSPYEEGEWRLKLWLFLAYVVSFISLATSVGLLIQDALVESGPSAWTGTAGVFQCVF 182
           DIDYSPY+EGEWRLKLWLF+AYVV+F+SLA SVGLLIQD++V++GPS WTG AGVFQCVF
Sbjct: 62  DIDYSPYDEGEWRLKLWLFIAYVVAFVSLAASVGLLIQDSVVKTGPSTWTGVAGVFQCVF 121

Query: 183 VLISGLFYWTSHSE 224
           VLISGL YWTSHSE
Sbjct: 122 VLISGLMYWTSHSE 135


>ref|XP_004140320.1| PREDICTED: transmembrane protein 50 homolog [Cucumis sativus]
           gi|449525329|ref|XP_004169670.1| PREDICTED:
           transmembrane protein 50 homolog [Cucumis sativus]
          Length = 135

 Score =  138 bits (347), Expect = 6e-31
 Identities = 62/74 (83%), Positives = 68/74 (91%)
 Frame = +3

Query: 3   DIDYSPYEEGEWRLKLWLFLAYVVSFISLATSVGLLIQDALVESGPSAWTGTAGVFQCVF 182
           DIDYSPYEEGEWRLKLWLF AYVVSF+SLA SVGLLIQD++V++GPS WTG AGV QCVF
Sbjct: 62  DIDYSPYEEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSVVKAGPSVWTGVAGVLQCVF 121

Query: 183 VLISGLFYWTSHSE 224
           VL+SGL YWTSHSE
Sbjct: 122 VLVSGLIYWTSHSE 135


Top