BLASTX nr result

ID: Panax21_contig00031041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031041
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD29834.2| putative ribosomal protein L2 [Vitis vinifera]        293   2e-77
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...   278   9e-73
ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...   276   3e-72
ref|YP_007375110.1| ribosomal protein L2 [Quercus rubra] gi|4414...   273   3e-71
ref|YP_002720176.1| rpl2 [Jatropha curcas] gi|224979627|gb|ACN72...   273   3e-71

>emb|CAD29834.2| putative ribosomal protein L2 [Vitis vinifera]
          Length = 163

 Score =  293 bits (750), Expect = 2e-77
 Identities = 148/163 (90%), Positives = 148/163 (90%)
 Frame = +1

Query: 52  EACTVWEGVLIDQKEESTSTDMPLGTAIQNIEITRGKGGQLARAAGAVAKLIAKEGKSAT 231
           EACTVWEGVLIDQKEESTSTDMPLGTAI NIEIT GKGGQLARAAGAVAKLIAKEGKSAT
Sbjct: 1   EACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSAT 60

Query: 232 LKLPSGEVRLISKNCSATXXXXXXXXXXXKSLGRAGSKRWLGKRPVVRGVVMNPVDHPHG 411
           LKLPSGEVRLISKNCSAT           KSLGRAGSK WLGKRPVVRGVVMNPVDHPHG
Sbjct: 61  LKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHG 120

Query: 412 GGEGRAPIGRKKATTPWGYPALGRRSRKRNKYSDNLILRRRSK 540
           GGEGRAPIGRKK TTPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 121 GGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 163


>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355506651|gb|AES87793.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 399

 Score =  278 bits (710), Expect = 9e-73
 Identities = 138/156 (88%), Positives = 141/156 (90%)
 Frame = +1

Query: 31  RKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIQNIEITRGKGGQLARAAGAVAKLIA 210
           RKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAI NIEIT GKGGQLARA GAVAKLIA
Sbjct: 170 RKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAPGAVAKLIA 229

Query: 211 KEGKSATLKLPSGEVRLISKNCSATXXXXXXXXXXXKSLGRAGSKRWLGKRPVVRGVVMN 390
           KEGKSATLKLPSGEVRLISKNCSAT           KSLGRAG+KRWLGKRPVVRGVVMN
Sbjct: 230 KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGAKRWLGKRPVVRGVVMN 289

Query: 391 PVDHPHGGGEGRAPIGRKKATTPWGYPALGRRSRKR 498
           PVDHPHGGGEGRAPIGRKK +TPWGYPALGRRSRK+
Sbjct: 290 PVDHPHGGGEGRAPIGRKKPSTPWGYPALGRRSRKK 325


>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2-B
           [Medicago truncatula]
          Length = 382

 Score =  276 bits (706), Expect = 3e-72
 Identities = 141/168 (83%), Positives = 145/168 (86%)
 Frame = +1

Query: 37  PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIQNIEITRGKGGQLARAAGAVAKLIAKE 216
           PYALEEACTVWEGVLIDQKEESTSTDMPLGTAI NIEIT GKGGQLARAAGAVAKLIAKE
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKE 294

Query: 217 GKSATLKLPSGEVRLISKNCSATXXXXXXXXXXXKSLGRAGSKRWLGKRPVVRGVVMNPV 396
           GKSATLKLPSGEVRLISKN                    +G+KRWLGKRPVVRGVVMNPV
Sbjct: 295 GKSATLKLPSGEVRLISKN--------------------SGAKRWLGKRPVVRGVVMNPV 334

Query: 397 DHPHGGGEGRAPIGRKKATTPWGYPALGRRSRKRNKYSDNLILRRRSK 540
           DHPHGGGEGRAPIGRKK +TPWGYPALGRRSRK+NKYSDNLILRRRSK
Sbjct: 335 DHPHGGGEGRAPIGRKKPSTPWGYPALGRRSRKKNKYSDNLILRRRSK 382


>ref|YP_007375110.1| ribosomal protein L2 [Quercus rubra] gi|441421989|gb|AGC31313.1|
           ribosomal protein L2 [Quercus rubra]
          Length = 287

 Score =  273 bits (697), Expect = 3e-71
 Identities = 144/175 (82%), Positives = 147/175 (84%)
 Frame = +1

Query: 16  ISSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIQNIEITRGKGGQLARAAGAV 195
           I S +  P  +  A  + E VLIDQKEESTSTDMPLGTAI NIEIT GKGGQLARAAGAV
Sbjct: 114 IVSGTEVPIKMGNALPLSE-VLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAV 172

Query: 196 AKLIAKEGKSATLKLPSGEVRLISKNCSATXXXXXXXXXXXKSLGRAGSKRWLGKRPVVR 375
           AKLIAKEGKSATLKLPSGEVRLISKNCSAT           KSLGRAGSK WLGKRPVVR
Sbjct: 173 AKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVR 232

Query: 376 GVVMNPVDHPHGGGEGRAPIGRKKATTPWGYPALGRRSRKRNKYSDNLILRRRSK 540
           GVVMNPVDHPHGGGEGRAPIGRKK  TPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 233 GVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 287


>ref|YP_002720176.1| rpl2 [Jatropha curcas] gi|224979627|gb|ACN72754.1| rpl2 [Jatropha
           curcas]
          Length = 287

 Score =  273 bits (697), Expect = 3e-71
 Identities = 144/175 (82%), Positives = 147/175 (84%)
 Frame = +1

Query: 16  ISSTSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGTAIQNIEITRGKGGQLARAAGAV 195
           I S +  P  +  A  + E VLIDQKEESTSTDMPLGTAI NIEIT GKGGQLARAAGAV
Sbjct: 114 IISGTEVPIKMGNALPLSE-VLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAV 172

Query: 196 AKLIAKEGKSATLKLPSGEVRLISKNCSATXXXXXXXXXXXKSLGRAGSKRWLGKRPVVR 375
           AKLIAKEGKSATLKLPSGEVRLISKNCSAT           KSLGRAGSK WLGKRPVVR
Sbjct: 173 AKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNTGVNQKSLGRAGSKCWLGKRPVVR 232

Query: 376 GVVMNPVDHPHGGGEGRAPIGRKKATTPWGYPALGRRSRKRNKYSDNLILRRRSK 540
           GVVMNPVDHPHGGGEGRAPIGRKK  TPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 233 GVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 287


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