BLASTX nr result

ID: Panax21_contig00031021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031021
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]         236   1e-60
emb|CBI36691.3| unnamed protein product [Vitis vinifera]              236   1e-60
ref|XP_002327873.1| predicted protein [Populus trichocarpa] gi|2...   231   6e-59
ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|2...   229   2e-58
ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   228   5e-58

>ref|XP_002268449.2| PREDICTED: protein YIF1B [Vitis vinifera]
          Length = 348

 Score =  236 bits (603), Expect = 1e-60
 Identities = 111/122 (90%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   LKVVLFPLLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLH 181
           LKVVLFP LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYV+LAG SLGL 
Sbjct: 159 LKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLR 218

Query: 182 GKFGPEALNWLFIKGLVGWCLQVSLLKMSLFSLGSGEAPLLDIVAYAGYTFTGMCMAILG 361
           GKF PEALNWLFIKGLVGWCLQVSLLK+SL SLGSGEAPLLDIVAYAGYTFTGMC+A+ G
Sbjct: 219 GKFTPEALNWLFIKGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFG 278

Query: 362 KI 367
           +I
Sbjct: 279 RI 280


>emb|CBI36691.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  236 bits (603), Expect = 1e-60
 Identities = 111/122 (90%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   LKVVLFPLLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLH 181
           LKVVLFP LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYV+LAG SLGL 
Sbjct: 148 LKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVILAGLSLGLR 207

Query: 182 GKFGPEALNWLFIKGLVGWCLQVSLLKMSLFSLGSGEAPLLDIVAYAGYTFTGMCMAILG 361
           GKF PEALNWLFIKGLVGWCLQVSLLK+SL SLGSGEAPLLDIVAYAGYTFTGMC+A+ G
Sbjct: 208 GKFTPEALNWLFIKGLVGWCLQVSLLKVSLLSLGSGEAPLLDIVAYAGYTFTGMCLAVFG 267

Query: 362 KI 367
           +I
Sbjct: 268 RI 269


>ref|XP_002327873.1| predicted protein [Populus trichocarpa] gi|222837282|gb|EEE75661.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  231 bits (588), Expect = 6e-59
 Identities = 109/123 (88%), Positives = 115/123 (93%)
 Frame = +2

Query: 2   LKVVLFPLLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLH 181
           LKVVLFP LHRGHW RITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAG SLGL+
Sbjct: 67  LKVVLFPFLHRGHWMRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGLSLGLN 126

Query: 182 GKFGPEALNWLFIKGLVGWCLQVSLLKMSLFSLGSGEAPLLDIVAYAGYTFTGMCMAILG 361
           GKF PEALNWLF+KGL+GW +QV+LLKM L SLGSGEAPLLDIVAYAGYTFTGMC A+LG
Sbjct: 127 GKFSPEALNWLFVKGLLGWFMQVALLKMILLSLGSGEAPLLDIVAYAGYTFTGMCFAVLG 186

Query: 362 KIL 370
           KIL
Sbjct: 187 KIL 189


>ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|222853332|gb|EEE90879.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  229 bits (583), Expect = 2e-58
 Identities = 107/123 (86%), Positives = 116/123 (94%)
 Frame = +2

Query: 2   LKVVLFPLLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLH 181
           LKVVLFP LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAG SLGL+
Sbjct: 80  LKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGLSLGLN 139

Query: 182 GKFGPEALNWLFIKGLVGWCLQVSLLKMSLFSLGSGEAPLLDIVAYAGYTFTGMCMAILG 361
           GKF PEALNWLF+KGL+GW +QV+LLK+ L SLGSGEAPLLD+VAYAGYTFTG+C A+LG
Sbjct: 140 GKFSPEALNWLFVKGLLGWFMQVALLKIILLSLGSGEAPLLDMVAYAGYTFTGICFAVLG 199

Query: 362 KIL 370
           KIL
Sbjct: 200 KIL 202


>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  228 bits (580), Expect = 5e-58
 Identities = 105/122 (86%), Positives = 116/122 (95%)
 Frame = +2

Query: 2   LKVVLFPLLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYVVLAGFSLGLH 181
           LKVVLFP LHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTY+VLAG SLGL+
Sbjct: 80  LKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYIPFMAFGTYIVLAGLSLGLN 139

Query: 182 GKFGPEALNWLFIKGLVGWCLQVSLLKMSLFSLGSGEAPLLDIVAYAGYTFTGMCMAILG 361
           GKF PE LNWLF+KGL+GW +QV+LLK++L SLGSGEAPLLDIVAYAGYTFTGMC+A+LG
Sbjct: 140 GKFSPENLNWLFVKGLLGWFMQVALLKVTLLSLGSGEAPLLDIVAYAGYTFTGMCIAVLG 199

Query: 362 KI 367
           +I
Sbjct: 200 RI 201


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