BLASTX nr result

ID: Panax21_contig00031007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00031007
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumi...   302   2e-80
emb|CBI22695.3| unnamed protein product [Vitis vinifera]              301   5e-80
ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis ...   301   5e-80
ref|XP_003549036.1| PREDICTED: SKP1-like protein 21-like [Glycin...   293   8e-78
ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|2...   287   7e-76

>ref|XP_004145972.1| PREDICTED: SKP1-like protein 21-like [Cucumis sativus]
           gi|449524038|ref|XP_004169030.1| PREDICTED: SKP1-like
           protein 21-like [Cucumis sativus]
          Length = 425

 Score =  302 bits (774), Expect = 2e-80
 Identities = 148/160 (92%), Positives = 154/160 (96%)
 Frame = -3

Query: 481 MSEGPMAVVKPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTSMGSSKNYAIKLP 302
           MSE  MAVVKPEMKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQT MGSSKNYAI LP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 301 QRVNPAILGLILDYCHFHQLPGRSNKERKTFDEKFIRLDTKKLCELTSAADSLQLRPLVD 122
           QRVNPAILGLILDYC FHQ+PGRSNKERKTFDEKFIR+DTKKLCELTSAADSLQL+PLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNM 2
           LTSRALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNI 160


>emb|CBI22695.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  301 bits (770), Expect = 5e-80
 Identities = 147/160 (91%), Positives = 154/160 (96%)
 Frame = -3

Query: 481 MSEGPMAVVKPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTSMGSSKNYAIKLP 302
           MSE  MAVVKPEMKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQT MGSSKNYAI LP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 301 QRVNPAILGLILDYCHFHQLPGRSNKERKTFDEKFIRLDTKKLCELTSAADSLQLRPLVD 122
           QRVNPAILGLILDYC FHQ+PGRSNKERK+FDEKFIR+DTKKLCELTSAADSLQL+PLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNM 2
           LTSRALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNI 160


>ref|XP_002269721.1| PREDICTED: SKP1-like protein 21-like [Vitis vinifera]
          Length = 359

 Score =  301 bits (770), Expect = 5e-80
 Identities = 147/160 (91%), Positives = 154/160 (96%)
 Frame = -3

Query: 481 MSEGPMAVVKPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTSMGSSKNYAIKLP 302
           MSE  MAVVKPEMKSYIWLQT DGSIQQVEEEVAMFCPMICRE+LQT MGSSKNYAI LP
Sbjct: 1   MSESAMAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREILQTGMGSSKNYAISLP 60

Query: 301 QRVNPAILGLILDYCHFHQLPGRSNKERKTFDEKFIRLDTKKLCELTSAADSLQLRPLVD 122
           QRVNPAILGLILDYC FHQ+PGRSNKERK+FDEKFIR+DTKKLCELTSAADSLQL+PLVD
Sbjct: 61  QRVNPAILGLILDYCRFHQVPGRSNKERKSFDEKFIRMDTKKLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNM 2
           LTSRALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNI 160


>ref|XP_003549036.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 376

 Score =  293 bits (751), Expect = 8e-78
 Identities = 146/161 (90%), Positives = 153/161 (95%), Gaps = 1/161 (0%)
 Frame = -3

Query: 481 MSEGPMAVVKPEM-KSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTSMGSSKNYAIKL 305
           MS+  MAVVKPEM KSYIWLQT DGSIQQVEEEVAMFCPMIC+EVLQT MGSSKNYAI L
Sbjct: 1   MSDAAMAVVKPEMMKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKNYAISL 60

Query: 304 PQRVNPAILGLILDYCHFHQLPGRSNKERKTFDEKFIRLDTKKLCELTSAADSLQLRPLV 125
           PQRVNPAILGLILDYC FHQ+PG SNKERKTFDEKFIR+DTKKLCELTSAADSLQL+PLV
Sbjct: 61  PQRVNPAILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKKLCELTSAADSLQLKPLV 120

Query: 124 DLTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNM 2
           DLTSRALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPLRN+
Sbjct: 121 DLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNI 161


>ref|XP_002318211.1| predicted protein [Populus trichocarpa] gi|222858884|gb|EEE96431.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  287 bits (734), Expect = 7e-76
 Identities = 138/160 (86%), Positives = 150/160 (93%)
 Frame = -3

Query: 481 MSEGPMAVVKPEMKSYIWLQTTDGSIQQVEEEVAMFCPMICREVLQTSMGSSKNYAIKLP 302
           M E  +AVVKPEMKSYIWLQT DGS+QQVEEEVAMFCPMICRE++Q  MGSSKN+AI LP
Sbjct: 1   MPEAGLAVVKPEMKSYIWLQTADGSVQQVEEEVAMFCPMICREIIQAGMGSSKNHAISLP 60

Query: 301 QRVNPAILGLILDYCHFHQLPGRSNKERKTFDEKFIRLDTKKLCELTSAADSLQLRPLVD 122
           QR+NPAILGLILDYC FHQ+PG SNKERKTFDEKFIR+DTK+LCELTSAADSLQL+PLVD
Sbjct: 61  QRLNPAILGLILDYCRFHQVPGHSNKERKTFDEKFIRMDTKRLCELTSAADSLQLKPLVD 120

Query: 121 LTSRALARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNM 2
           LTSRALAR+IEGKTPEEIRETFHLPDDLTEEEKLEPL N+
Sbjct: 121 LTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLGNI 160


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