BLASTX nr result

ID: Panax21_contig00029491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029491
         (1060 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519820.1| conserved hypothetical protein [Ricinus comm...    69   2e-09
ref|XP_002329564.1| predicted protein [Populus trichocarpa] gi|2...    66   2e-08
ref|NP_568669.1| microspore-specific promoter 2 [Arabidopsis tha...    57   8e-06
gb|ABK28747.1| unknown [Arabidopsis thaliana]                          57   8e-06
gb|AAM61509.1| unknown [Arabidopsis thaliana]                          57   8e-06

>ref|XP_002519820.1| conserved hypothetical protein [Ricinus communis]
           gi|223540866|gb|EEF42424.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 41/81 (50%), Positives = 58/81 (71%)
 Frame = -2

Query: 717 MEDQQLQSHSFMPLLSRVDRLDSVITYIEKKEKLSKWRKCSSNSIGKKDRKDMALKVAAQ 538
           MED + +S S +PL+SR+DRLD ++ Y+E K+ LSK   CSSN  G  +R+ + L +A +
Sbjct: 1   MEDPR-ESRSSIPLVSRLDRLDFIMKYLEGKQNLSK---CSSNIRGI-ERQSVPLDLAVR 55

Query: 537 EAHCKGSLMDRILSLEDRLVQ 475
           EA+ KGSLMDR+  LE RL+Q
Sbjct: 56  EAYFKGSLMDRVAFLERRLLQ 76


>ref|XP_002329564.1| predicted protein [Populus trichocarpa] gi|222870273|gb|EEF07404.1|
           predicted protein [Populus trichocarpa]
          Length = 187

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 36/74 (48%), Positives = 47/74 (63%)
 Frame = -2

Query: 696 SHSFMPLLSRVDRLDSVITYIEKKEKLSKWRKCSSNSIGKKDRKDMALKVAAQEAHCKGS 517
           SHS M L+ R+D LD V+ Y+E K  L KWR   + S+G   R+ M + +A +EA  KGS
Sbjct: 7   SHSSMSLVPRLDHLDFVMKYLEGKRHLPKWR--GNCSVGGAGRQSMPMDLAVKEACLKGS 64

Query: 516 LMDRILSLEDRLVQ 475
           LMDR+  LE RL Q
Sbjct: 65  LMDRVACLEHRLFQ 78


>ref|NP_568669.1| microspore-specific promoter 2 [Arabidopsis thaliana]
           gi|91807004|gb|ABE66229.1| unknown [Arabidopsis
           thaliana] gi|332008044|gb|AED95427.1|
           microspore-specific promoter 2 [Arabidopsis thaliana]
          Length = 192

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 711 DQQLQSHSFMPLLSRVDRLDSVITYIEKKEKLSKWR-KCSSNSIGKKDRKDMALKVAAQE 535
           +QQ  S S +P+LSR++ LD VI  +E+++ L KW+ + +  + G  DR       A +E
Sbjct: 5   EQQKHSLSSLPMLSRLEHLDFVIKNLERQQNLPKWKDESAPTTRGLIDR-----GTAIRE 59

Query: 534 AHCKGSLMDRILSLEDRLVQ 475
           A+ KGSL+DRI +LE RL Q
Sbjct: 60  AYFKGSLLDRIAALETRLFQ 79


>gb|ABK28747.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 711 DQQLQSHSFMPLLSRVDRLDSVITYIEKKEKLSKWR-KCSSNSIGKKDRKDMALKVAAQE 535
           +QQ  S S +P+LSR++ LD VI  +E+++ L KW+ + +  + G  DR       A +E
Sbjct: 5   EQQKHSLSSLPMLSRLEHLDFVIKNLERQQNLPKWKDESAPTTRGLIDR-----GTAIRE 59

Query: 534 AHCKGSLMDRILSLEDRLVQ 475
           A+ KGSL+DRI +LE RL Q
Sbjct: 60  AYFKGSLLDRIAALETRLFQ 79


>gb|AAM61509.1| unknown [Arabidopsis thaliana]
          Length = 191

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
 Frame = -2

Query: 711 DQQLQSHSFMPLLSRVDRLDSVITYIEKKEKLSKWR-KCSSNSIGKKDRKDMALKVAAQE 535
           +QQ  S S +P+LSR++ LD VI  +E+++ L KW+ + +  + G  DR       A +E
Sbjct: 5   EQQRHSLSSLPMLSRLEHLDFVIKNLERQQNLPKWKDESAPTTRGLIDR-----GTAIRE 59

Query: 534 AHCKGSLMDRILSLEDRLVQ 475
           A+ KGSL+DRI +LE RL Q
Sbjct: 60  AYFKGSLLDRIAALETRLFQ 79


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