BLASTX nr result

ID: Panax21_contig00029488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029488
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...    60   1e-07
ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-l...    59   3e-07
ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...    59   3e-07
ref|XP_002302819.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-l...    57   1e-06

>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 451 SAINMMNGCQLGGKMLKVQLKRDNKQNKPY 362
           +AINMMNGCQLGGK LKVQLKRDNKQ+KPY
Sbjct: 407 TAINMMNGCQLGGKKLKVQLKRDNKQSKPY 436


>ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
          Length = 429

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 451 SAINMMNGCQLGGKMLKVQLKRDNKQNKPY 362
           SAI+MMNGCQLGGK LKVQLKRDNKQ KPY
Sbjct: 400 SAISMMNGCQLGGKKLKVQLKRDNKQGKPY 429


>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 451 SAINMMNGCQLGGKMLKVQLKRDNKQNKPY 362
           SAI+MMNGCQLGGK LKVQLKRDNKQ KPY
Sbjct: 402 SAISMMNGCQLGGKKLKVQLKRDNKQGKPY 431


>ref|XP_002302819.1| predicted protein [Populus trichocarpa] gi|222844545|gb|EEE82092.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -3

Query: 451 SAINMMNGCQLGGKMLKVQLKRDNKQNKPY 362
           +AI MMNGCQLGGKMLKVQLK+DNKQ+KPY
Sbjct: 367 NAITMMNGCQLGGKMLKVQLKKDNKQSKPY 396


>ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
           gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP
           Elav-like family member 2-like [Cucumis sativus]
          Length = 438

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 451 SAINMMNGCQLGGKMLKVQLKRDNKQNKPY 362
           SAI+ MNGCQLGGK LKVQLKRDNKQ+KPY
Sbjct: 409 SAISTMNGCQLGGKKLKVQLKRDNKQSKPY 438


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