BLASTX nr result
ID: Panax21_contig00029487
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00029487
(945 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi... 398 e-109
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,... 392 e-107
ref|NP_179305.2| pentatricopeptide repeat-containing protein [Ar... 372 e-101
ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. l... 368 e-99
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi... 353 3e-95
>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
protein product [Vitis vinifera]
Length = 878
Score = 398 bits (1023), Expect = e-109
Identities = 199/316 (62%), Positives = 243/316 (76%), Gaps = 5/316 (1%)
Frame = -1
Query: 933 EQAKKLATTLIKNTNNPTLAWQLFRRISSNPSSFSHI-----LDSVPLMTRILVAAQMFN 769
+Q KL LIKNT+NPTLAW LF+RI S P+S S I L S+P++T IL+ A+M +
Sbjct: 2 DQRNKLTKALIKNTHNPTLAWHLFKRILSIPTSSSSISSRSILRSIPIITHILIRAKMIS 61
Query: 768 EIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNL 589
+ID L QLLL P + SH L+ ++RI+AKSG D A F+S R+ PA P + LYN+
Sbjct: 62 QIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNM 121
Query: 588 LIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKG 409
++ESSLR+ D SWLY+D++++G+SPETYT NLLI LCDSGR EDAR +FDKM KG
Sbjct: 122 VLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKG 181
Query: 408 CRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAE 229
CRPNEFS GILVRGYCR GL+ + +ELL+ M GV PN VIYNTLISSFC++G+ +EAE
Sbjct: 182 CRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAE 241
Query: 228 KLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLM 49
+LVERMRE G+ PDVVTFNSRISALCS GKILEASRIFRDMQID++LGLP+PN TFNLM
Sbjct: 242 RLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLM 301
Query: 48 LRGFYNEGMMEEAGTL 1
L GF EGM+EEA TL
Sbjct: 302 LEGFCKEGMLEEAKTL 317
Score = 108 bits (270), Expect = 2e-21
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 19/282 (6%)
Frame = -1
Query: 798 RILVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPA 619
+IL A+++F ++ I +L L P T+ N ++ K G +++A S++ +
Sbjct: 271 KILEASRIFRDMQIDEELGLPRPNITTFN---LMLEGFCKEGMLEEAKTLVESMKRN--G 325
Query: 618 KPLSISLYNLLIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDAR 439
+ + YN+ + +R+ ++++ GI P Y+FN ++ LC +G + DAR
Sbjct: 326 NLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDAR 385
Query: 438 NLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSF 259
+ M G P+ + L+ G C G + +L+ M G +PN N L+ S
Sbjct: 386 MIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSL 445
Query: 258 CKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLP 79
K+G+ EAEKL+++M E D VT N I LC GK+ EA I M I L
Sbjct: 446 WKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALG 505
Query: 78 Q-------------------PNKVTFNLMLRGFYNEGMMEEA 10
P+ +T+++++ G G ++EA
Sbjct: 506 NLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEA 547
Score = 90.9 bits (224), Expect = 4e-16
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 6/223 (2%)
Frame = -1
Query: 687 IAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNL------LIESSLRDKNTDFVSWLYEDL 526
+ KSG +D+A+ + H A +L NL L++SS K
Sbjct: 480 LCKSGKLDEAVEIVEGMWIHGSA-----ALGNLGNSFIGLVDSSSNGKKC---------- 524
Query: 525 ILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCRFGLA 346
P+ T++++I LC +GRL++AR F +M K P+ + +C+ G
Sbjct: 525 -----LPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKI 579
Query: 345 SQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRESGISPDVVTFNSR 166
S +L M + G + YN+LI + E L++ M+E GI+P++ T+N+
Sbjct: 580 SSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNM 639
Query: 165 ISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGF 37
IS LC G+I +A+ + +M + K + PN +F L+++ F
Sbjct: 640 ISCLCEGGRIKDATSLLDEM-LQKGI---SPNISSFRLLIKAF 678
Score = 77.0 bits (188), Expect = 6e-12
Identities = 68/251 (27%), Positives = 103/251 (41%), Gaps = 35/251 (13%)
Frame = -1
Query: 702 TIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRDKNTDF-VSWLYEDL 526
T + K G I A + + K S+ YN LI L KN F + L +D+
Sbjct: 568 TFIHSFCKHGKISSAFRVLKDMEKRGCNK--SLQTYNSLI-LGLGSKNQIFEIYGLLDDM 624
Query: 525 ILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCR---F 355
GI+P T+N +I LC+ GR++DA +L D+M KG PN S +L++ +C+ F
Sbjct: 625 KEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDF 684
Query: 354 GLA-------------------------------SQGVELLNAMRELGVAPNAVIYNTLI 268
G+ S+ EL +A + YN LI
Sbjct: 685 GVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLI 744
Query: 267 SSFCKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDL 88
CKD + A ++ +M + G D +F I L GK +A + M
Sbjct: 745 EKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804
Query: 87 GLPQPNKVTFN 55
G+ + NK+T N
Sbjct: 805 GMVE-NKITRN 814
Score = 58.5 bits (140), Expect = 2e-06
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 2/235 (0%)
Frame = -1
Query: 699 IVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRDKNTDFVSWLYEDLIL 520
I+ + K+G +D+A F + P SI +Y+ I S + + +D+
Sbjct: 534 IINGLCKAGRLDEARKKFIEM-VGKSLHPDSI-IYDTFIHSFCKHGKISSAFRVLKDMEK 591
Query: 519 SGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQ 340
G + T+N LI L ++ + L D M +KG PN + ++ C G
Sbjct: 592 RGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKD 651
Query: 339 GVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRESGISPDVVTFNSRIS 160
LL+ M + G++PN + LI +FCK +++ E + S ++ +
Sbjct: 652 ATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE-IALSICGHKEALYSLMFN 710
Query: 159 ALCSVGKILEASRIFRDMQIDK--DLGLPQPNKVTFNLMLRGFYNEGMMEEAGTL 1
L G++ EA +F D +D+ DLG +N ++ + M+E A +
Sbjct: 711 ELLIGGEVSEAKELF-DAALDRCFDLG-----NFQYNDLIEKLCKDEMLENASDI 759
>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 874
Score = 392 bits (1006), Expect = e-107
Identities = 192/308 (62%), Positives = 244/308 (79%), Gaps = 1/308 (0%)
Frame = -1
Query: 921 KLATTLIKNTNNPTLAWQLFRRISSNPSSFSHILDSVPLMTRILVAAQMFNEIDILNQLL 742
KL L+ N +NP LAW LF+RI S P S +H S+P+++RIL+ ++MFNE+D L+QLL
Sbjct: 6 KLTKALLNNAHNPKLAWHLFKRILSLPISSNHRSQSIPIISRILIRSKMFNELDDLHQLL 65
Query: 741 LSHP-LQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRD 565
L+ P L++S + L +V ++AKSG +KAI HF+SLR++FP K SI LYN+L++S +R+
Sbjct: 66 LNSPSLESSDSSLENLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRE 125
Query: 564 KNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSV 385
+ VSWLY+D++L+ +SPE YTFNLLIG LCDSG LEDAR LFDKM +GC PNEF+
Sbjct: 126 NRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTF 185
Query: 384 GILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRE 205
GILVRGYCR GLAS+G+ELL MR +G+ PN V+YNTLISSFCK+GKT +AEKLV++MRE
Sbjct: 186 GILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMRE 245
Query: 204 SGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGFYNEG 25
G+ P V TFNSRISALC GKILEASRIFRDMQID++LGLP PN +T+ LML GF EG
Sbjct: 246 DGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEG 305
Query: 24 MMEEAGTL 1
M+EEA TL
Sbjct: 306 MLEEAKTL 313
Score = 107 bits (267), Expect = 4e-21
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 19/282 (6%)
Frame = -1
Query: 798 RILVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPA 619
+IL A+++F ++ I +L L HP ++ ++ K G +++A +++ + A
Sbjct: 267 KILEASRIFRDMQIDEELGLPHPNVITYK---LMLMGFCKEGMLEEAKTLVDTMKRN--A 321
Query: 618 KPLSISLYNLLIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDAR 439
+++ YN+ + +R+ + ++++ GI P+ Y++N+++ LC +G L DAR
Sbjct: 322 NFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR 381
Query: 438 NLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSF 259
L M G P+ + L+ GYC G + LL+ M +PN N L+ S
Sbjct: 382 MLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSL 441
Query: 258 CKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLP 79
K+G+ EAE L+++M E G D VT N I+ALC+ G++ +A I M L
Sbjct: 442 WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALG 501
Query: 78 Q-------------------PNKVTFNLMLRGFYNEGMMEEA 10
P+ VT++ ++ G G +++A
Sbjct: 502 NLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDA 543
Score = 102 bits (253), Expect = 2e-19
Identities = 60/221 (27%), Positives = 106/221 (47%)
Frame = -1
Query: 699 IVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRDKNTDFVSWLYEDLIL 520
I+ + +G +DKAI + TH A +L + F+ + + +
Sbjct: 472 IINALCNNGQLDKAIEIVNGMWTHGSA--------------ALGNLGNSFIGLVDDTISG 517
Query: 519 SGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQ 340
+P+ T++ +I LC +GRL+DA+ F +M KG +P+ + +CR G S
Sbjct: 518 KKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISS 577
Query: 339 GVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRESGISPDVVTFNSRIS 160
++L M + G YN+LI + E L++ MRE G+SPDV T+N ++
Sbjct: 578 AFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLN 637
Query: 159 ALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGF 37
LC G+I +A + +M + K + PN +F ++++ F
Sbjct: 638 CLCEGGRINDAPSVLDEM-LQKGI---SPNISSFRILIKAF 674
Score = 70.9 bits (172), Expect = 4e-10
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 4/252 (1%)
Frame = -1
Query: 744 LLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRD 565
++S LQ T + + G I A + + K L YN LI L
Sbjct: 550 MMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQT--YNSLI-LGLGS 606
Query: 564 KNTDFVSW-LYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFS 388
KN F + L +++ G+SP+ T+N ++ LC+ GR+ DA ++ D+M KG PN S
Sbjct: 607 KNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISS 666
Query: 387 VGILVRGYCR---FGLASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVE 217
IL++ +C+ F + + E+ A+ G +Y + + GK EA++L E
Sbjct: 667 FRILIKAFCKACDFKASHEVFEI--ALNVCG--HKEALYTLMFNELLVGGKVAEAKELFE 722
Query: 216 RMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGF 37
+ + I LC K+ AS + + IDK Q + +F ++ GF
Sbjct: 723 TALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRL-IDKGY---QFDPASFMPVIDGF 778
Query: 36 YNEGMMEEAGTL 1
G A L
Sbjct: 779 GKMGNKHVADEL 790
>ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g17140 gi|110737729|dbj|BAF00803.1| hypothetical
protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 372 bits (954), Expect = e-101
Identities = 178/311 (57%), Positives = 241/311 (77%), Gaps = 3/311 (0%)
Frame = -1
Query: 924 KKLATTLIKNTNNPTLAWQLFRRISSNPSSFSH--ILDSVPLMTRILVAAQMFNEIDILN 751
+ L L+KNTNNP LAW++F+RI S+PS SH LD+ P + RILV A+M EI L+
Sbjct: 3 QSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELH 62
Query: 750 QLLLSHPLQ-TSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESS 574
L+LS +Q T + L+++V I AKS HIDKA P F+ +R+ FP S+ LYNLL+ES
Sbjct: 63 NLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESC 122
Query: 573 LRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNE 394
++++ +FVSWLY+D++L GI+P+TYTFNLLI LCDS ++ AR LFD+M +KGC+PNE
Sbjct: 123 IKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNE 182
Query: 393 FSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVER 214
F+ GILVRGYC+ GL +G+ELLNAM GV PN VIYNT++SSFC++G+ D++EK+VE+
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEK 242
Query: 213 MRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGFY 34
MRE G+ PD+VTFNSRISALC GK+L+ASRIF DM++D+ LGLP+PN +T+NLML+GF
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 33 NEGMMEEAGTL 1
G++E+A TL
Sbjct: 303 KVGLLEDAKTL 313
Score = 109 bits (273), Expect = 8e-22
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 19/285 (6%)
Frame = -1
Query: 798 RILVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPA 619
++L A+++F+++++ L L P ++N +++ K G ++ A F S+R +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYN---LMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 618 KPLSISLYNLLIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDAR 439
S+ YN+ ++ +R + + + GI P Y++N+L+ LC G L DA+
Sbjct: 324 A--SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 438 NLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSF 259
+ M G P+ + G L+ GYC G LL M PNA N L+ S
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 258 CKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLP 79
K G+ EAE+L+ +M E G D VT N + LC G++ +A I + M++ L
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 78 Q-------------------PNKVTFNLMLRGFYNEGMMEEAGTL 1
P+ +T++ +L G G EA L
Sbjct: 502 NLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Score = 96.7 bits (239), Expect = 7e-18
Identities = 59/221 (26%), Positives = 108/221 (48%)
Frame = -1
Query: 699 IVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRDKNTDFVSWLYEDLIL 520
IV + SG +DKAI + +R H A +L + ++ + + LI
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSA--------------ALGNLGNSYIGLVDDSLIE 517
Query: 519 SGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQ 340
+ P+ T++ L+ LC +GR +A+NLF +M + +P+ + I + +C+ G S
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISS 577
Query: 339 GVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRESGISPDVVTFNSRIS 160
+L M + G + YN+LI + E L++ M+E GISP++ T+N+ I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQ 637
Query: 159 ALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGF 37
LC K+ +A+ + +M + K++ PN +F ++ F
Sbjct: 638 YLCEGEKVEDATNLLDEM-MQKNIA---PNVFSFKYLIEAF 674
Score = 72.0 bits (175), Expect = 2e-10
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 4/240 (1%)
Frame = -1
Query: 792 LVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKP 613
L A F E L ++ LQ + K G I A + + K
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK- 592
Query: 612 LSISLYNLLIESSLRDKNTDF-VSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARN 436
S+ YN LI L KN F + L +++ GISP T+N I +LC+ ++EDA N
Sbjct: 593 -SLETYNSLI-LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 435 LFDKMFDKGCRPNEFSVGILVRGYCR---FGLASQGVELLNAMRELGVAPNAVIYNTLIS 265
L D+M K PN FS L+ +C+ F +A + E ++ ++++N L++
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA 710
Query: 264 SFCKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLG 85
+ G+ +A +L+E + + G + + +LC ++ AS I M ID+ G
Sbjct: 711 A----GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM-IDRGYG 765
>ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 874
Score = 368 bits (945), Expect = e-99
Identities = 178/311 (57%), Positives = 239/311 (76%), Gaps = 3/311 (0%)
Frame = -1
Query: 924 KKLATTLIKNTNNPTLAWQLFRRISSNPSSFSH--ILDSVPLMTRILVAAQMFNEIDILN 751
+ L L+KNTNNP LAW++F+RI S+PS SH L + P M ILV A+M EI+ L+
Sbjct: 3 QSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLAATPTMACILVRAKMHEEIEELH 62
Query: 750 QLLLSHPLQ-TSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESS 574
L+LS +Q T + L+++V I AKS HIDKA P F+ +R+ FP I LYN+L+ES
Sbjct: 63 NLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESC 122
Query: 573 LRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNE 394
+R++ +FVSWLY+D++L GISPETYTFNLLI LCDS ++ AR LFD+M +KGC+PNE
Sbjct: 123 IRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNE 182
Query: 393 FSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVER 214
F+ GILVRGYC+ GL +G+ELLN+M GV PN V+YNT++SSFC++G+ D++EKLVE+
Sbjct: 183 FTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEK 242
Query: 213 MRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGFY 34
MRE G+ PD+VTFNSRISALC GK+L+ASRIF DM++D+ LGLP+PN +T+NLML+GF
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 33 NEGMMEEAGTL 1
G++E+A TL
Sbjct: 303 KVGLLEDAKTL 313
Score = 113 bits (282), Expect = 7e-23
Identities = 76/285 (26%), Positives = 130/285 (45%), Gaps = 19/285 (6%)
Frame = -1
Query: 798 RILVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPA 619
++L A+++F+++++ L L P ++N +++ K G ++ A F S+R +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYN---LMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 618 KPLSISLYNLLIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDAR 439
+S+ YN+ ++ +R + + +I GI P Y++N+L+ LC G L DA+
Sbjct: 324 --VSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 438 NLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSF 259
+ M G P+ + G L+ GYC G LL M PNA N L+ S
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 258 CKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLP 79
G+ EAE+L+ +M E G D VT N + LC G++ +A I + M++ L
Sbjct: 442 WNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 78 Q-------------------PNKVTFNLMLRGFYNEGMMEEAGTL 1
P+ +T++ +L G G EA TL
Sbjct: 502 NLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546
Score = 98.2 bits (243), Expect = 2e-18
Identities = 60/221 (27%), Positives = 108/221 (48%)
Frame = -1
Query: 699 IVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRDKNTDFVSWLYEDLIL 520
IV + SG +DKAI + +R H A +L + ++ + + LI
Sbjct: 472 IVDGLCGSGELDKAIEIVKGMRVHGSA--------------ALGNLGNSYIGLVDDSLIE 517
Query: 519 SGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQ 340
+ P+ T++ L+ LC +GR +A+ LF +M + +P+ + I + +C+ G S
Sbjct: 518 NNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISS 577
Query: 339 GVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRESGISPDVVTFNSRIS 160
+L M + G + YN+LI + E L++ MRE GISP++ T+N+ I
Sbjct: 578 AFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQ 637
Query: 159 ALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGF 37
LC GK+ +A+ + +M + K++ PN +F ++ F
Sbjct: 638 YLCEGGKVEDATNLLDEM-MQKNIA---PNVFSFKYLIGAF 674
Score = 75.5 bits (184), Expect = 2e-11
Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 4/240 (1%)
Frame = -1
Query: 792 LVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKP 613
L A F E L ++ LQ + K G I A + + K
Sbjct: 534 LCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK- 592
Query: 612 LSISLYNLLIESSLRDKNTDF-VSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARN 436
S+ YN LI L KN F + L +++ GISP T+N I +LC+ G++EDA N
Sbjct: 593 -SLETYNSLI-LGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATN 650
Query: 435 LFDKMFDKGCRPNEFSVGILVRGYCR---FGLASQGVELLNAMRELGVAPNAVIYNTLIS 265
L D+M K PN FS L+ +C+ F +A + E ++ ++++N L++
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA 710
Query: 264 SFCKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLG 85
+ G+ +A +L+E + + G + + +LC ++ AS I M IDK G
Sbjct: 711 A----GQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKM-IDKGYG 765
>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 353 bits (906), Expect = 3e-95
Identities = 179/313 (57%), Positives = 228/313 (72%), Gaps = 5/313 (1%)
Frame = -1
Query: 933 EQAKKLATTLIKNTNNPTLAWQLFRRISSNP-----SSFSHILDSVPLMTRILVAAQMFN 769
++A KL+ + N+NNP LAW LF+RI S+P S F L SVP + RIL+ A+M
Sbjct: 4 DRAAKLSKAIYLNSNNPNLAWLLFKRILSSPIPASSSFFKPSLQSVPAIARILITAKMHP 63
Query: 768 EIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNL 589
+ID L+QLLLS +H ++VR +A G ++ AI FRSLR FP P IS YNL
Sbjct: 64 QIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNL 123
Query: 588 LIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLFDKMFDKG 409
L SL++ D V WLY+D+ ++ + P+TYTFNLLI LC+ G LE+AR +FDKM +KG
Sbjct: 124 LFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKG 183
Query: 408 CRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAE 229
C+PNEFS+GILVRGYCR GL S G++LL+ MR G PN V YNT+ISS C +G+T EAE
Sbjct: 184 CKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAE 243
Query: 228 KLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLM 49
KLVE+MRE G+SPD+VTFN RI+ALC G+ILEASRIFRDMQID+++GLP+PN VT+NLM
Sbjct: 244 KLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLM 303
Query: 48 LRGFYNEGMMEEA 10
L GF +EGM EEA
Sbjct: 304 LEGFCSEGMFEEA 316
Score = 104 bits (259), Expect = 3e-20
Identities = 65/231 (28%), Positives = 113/231 (48%)
Frame = -1
Query: 798 RILVAAQMFNEIDILNQLLLSHPLQTSHNHLVTIVRIIAKSGHIDKAIPHFRSLRTHFPA 619
+IL A+++F ++ I ++ L P ++N ++ G ++A F S++ +
Sbjct: 273 QILEASRIFRDMQIDEEMGLPKPNTVTYN---LMLEGFCSEGMFEEARAIFDSMKN---S 326
Query: 618 KPLSISLYNLLIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDAR 439
+ LS+ YN+ + +R + ++ I P Y++N+L+ LC G DAR
Sbjct: 327 ETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDAR 386
Query: 438 NLFDKMFDKGCRPNEFSVGILVRGYCRFGLASQGVELLNAMRELGVAPNAVIYNTLISSF 259
++ M + G P+ + L+ GYCR G + +L M ++G PN N L+ S
Sbjct: 387 SILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSL 446
Query: 258 CKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDM 106
K+G+ EAE L++ M E G D VT N+ I+ LC G + +A I M
Sbjct: 447 WKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGM 497
Score = 83.6 bits (205), Expect = 6e-14
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 2/225 (0%)
Frame = -1
Query: 702 TIVRIIAKSGHIDKAIPHFRSLRTHFPAKPLSISLYNLLIESSLRDKNTDFVSWLYEDLI 523
T++ + K+G++DKAI + T A SL + F+ D+
Sbjct: 476 TMINGLCKAGNLDKAIEIVSGMWTRGSA--------------SLGNLGNSFIDLF--DIR 519
Query: 522 LSGIS--PETYTFNLLIGWLCDSGRLEDARNLFDKMFDKGCRPNEFSVGILVRGYCRFGL 349
+G P++ T+ +IG LC GR+++A+ +M K P+ + YC+ G
Sbjct: 520 NNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGK 579
Query: 348 ASQGVELLNAMRELGVAPNAVIYNTLISSFCKDGKTDEAEKLVERMRESGISPDVVTFNS 169
S +L M + G + YN+LI + + E L++ M+E GI P+V T+N+
Sbjct: 580 LSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNN 639
Query: 168 RISALCSVGKILEASRIFRDMQIDKDLGLPQPNKVTFNLMLRGFY 34
IS L GK+ +A+ + +M + K + PN TF +++ F+
Sbjct: 640 IISCLSEGGKLKDATCLLDEM-LQKGI---SPNIYTFRILIGAFF 680
Score = 71.2 bits (173), Expect = 3e-10
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Frame = -1
Query: 609 SISLYNLLIESSLRDKNTDFVSWLYEDLILSGISPETYTFNLLIGWLCDSGRLEDARNLF 430
S+ YN LI+ + + L +++ GI P YT+N +I L + G+L+DA L
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLL 657
Query: 429 DKMFDKGCRPNEFSVGILVRGY---CRFGLASQGVELLNAMRELGVAPNAVIYNTLISSF 259
D+M KG PN ++ IL+ + C FG A + E+ ++ +Y+ + +
Sbjct: 658 DEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSL----CGHKESLYSFMFNEL 713
Query: 258 CKDGKTDEAEKLVERMRESGISPDVVTFNSRISALCSVGKILEASRIFRDM 106
G+T +A++L E + ++ + I LC GK+ +AS I M
Sbjct: 714 LAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKM 764