BLASTX nr result

ID: Panax21_contig00029472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029472
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279486.1| PREDICTED: putative transcription factor bHL...   127   1e-27
ref|XP_002309216.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002514122.1| DNA binding protein, putative [Ricinus commu...   121   7e-26
ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative tra...   120   2e-25
ref|XP_003565458.1| PREDICTED: putative transcription factor bHL...   112   4e-23

>ref|XP_002279486.1| PREDICTED: putative transcription factor bHLH041 [Vitis vinifera]
           gi|297738655|emb|CBI27900.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score =  127 bits (318), Expect = 1e-27
 Identities = 79/141 (56%), Positives = 101/141 (71%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8   GNRPASNQLHHMISERRRREKLNESFQALRSLLPPGSKKDKASVLSSTKEYVNSLKAEVE 187
           G+ P+ +QLHHMISER+RREKLNESF ALR+LLPPGSKKDKASVLS T+EY++SLKA++ 
Sbjct: 327 GSHPSVSQLHHMISERKRREKLNESFHALRTLLPPGSKKDKASVLSGTREYLSSLKAQIL 386

Query: 188 ELRRKNQILEAQL-LQNDDQELGQMITGTDSSTTDQRVVDVRITNIINAETTSSEAARIL 364
           EL ++NQ LEAQ+ L+N+    G    G DSS      + V+ITN   +E T  E  R +
Sbjct: 387 ELTQRNQALEAQINLKNEGNNEG----GGDSS---NERLSVQITNA--SEPTPEE--RNI 435

Query: 365 DLRVIVRSGGEYYCSMLDLAI 427
           DL+V VR+     CS+LDL I
Sbjct: 436 DLQVTVRAD----CSILDLVI 452


>ref|XP_002309216.1| predicted protein [Populus trichocarpa] gi|222855192|gb|EEE92739.1|
           predicted protein [Populus trichocarpa]
          Length = 395

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 8/128 (6%)
 Frame = +2

Query: 8   GNRPASNQLHHMISERRRREKLNESFQALRSLLPPGSKKDKASVLSSTKEYVNSLKAEVE 187
           G RP+S QLHHMISER+RREK+NESF+ALRS+LPP +KKDKAS+L+ T+EY+ SLKA+VE
Sbjct: 211 GGRPSSTQLHHMISERKRREKINESFKALRSILPPEAKKDKASILTRTREYLTSLKAQVE 270

Query: 188 ELRRKNQILEAQLLQ--------NDDQELGQMITGTDSSTTDQRVVDVRITNIINAETTS 343
           EL RKNQ LEAQL +        +  + L   +T    ST++QR++D+ +     +    
Sbjct: 271 ELTRKNQKLEAQLSKAAVSQVRDSSYERLDVRVTHISESTSEQRIIDLVVNLRGESPILD 330

Query: 344 SEAARILD 367
           +   RIL+
Sbjct: 331 TVITRILE 338


>ref|XP_002514122.1| DNA binding protein, putative [Ricinus communis]
           gi|223546578|gb|EEF48076.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 502

 Score =  121 bits (303), Expect = 7e-26
 Identities = 70/140 (50%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
 Frame = +2

Query: 11  NRPASNQLHHMISERRRREKLNESFQALRSLLPPGSKKDKASVLSSTKEYVNSLKAEVEE 190
           NRP + QLHHMISER+RREK+NESF+ALR LLPP +KKDKASVL+ T+EY+  LK +V E
Sbjct: 309 NRPTTTQLHHMISERKRREKINESFEALRKLLPPEAKKDKASVLTRTREYLTLLKTQVAE 368

Query: 191 LRRKNQILEAQLLQND-DQELGQMITGTDSSTTDQRVVDVRITNIINAETTSSEAARILD 367
           L ++NQ LEA+LL    +   G++I     S + +  V+VRITN+     ++SE  RI++
Sbjct: 369 LSQRNQQLEAELLPAAIEAHAGEVIAENQQSGSWEGRVEVRITNV---SESTSEDERIIN 425

Query: 368 LRVIVRSGGEYYCSMLDLAI 427
           L +++R  GE  C + D  I
Sbjct: 426 LLIVLR--GE--CPVSDFVI 441


>ref|XP_004173552.1| PREDICTED: LOW QUALITY PROTEIN: putative transcription factor
           bHLH041-like, partial [Cucumis sativus]
          Length = 461

 Score =  120 bits (300), Expect = 2e-25
 Identities = 68/130 (52%), Positives = 95/130 (73%)
 Frame = +2

Query: 11  NRPASNQLHHMISERRRREKLNESFQALRSLLPPGSKKDKASVLSSTKEYVNSLKAEVEE 190
           +RP S+QLHH+ISERRRREKLN+SFQAL+SLLPPG+KKDK SVL++T+EY++SLKA+V E
Sbjct: 294 SRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTREYMSSLKAQVAE 353

Query: 191 LRRKNQILEAQLLQNDDQELGQMITGTDSSTTDQRVVDVRITNIINAETTSSEAARILDL 370
           L R+NQ LEAQLLQ+  +E        + +   Q+ +  R+  I   + ++SE  +I+DL
Sbjct: 354 LSRRNQQLEAQLLQSCKEE------EKEEAIFPQKEIRFRV-GISQVQESTSE-GQIIDL 405

Query: 371 RVIVRSGGEY 400
            +  R  GE+
Sbjct: 406 NIATR--GEF 413


>ref|XP_003565458.1| PREDICTED: putative transcription factor bHLH041-like [Brachypodium
           distachyon]
          Length = 460

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/123 (47%), Positives = 86/123 (69%)
 Frame = +2

Query: 14  RPASNQLHHMISERRRREKLNESFQALRSLLPPGSKKDKASVLSSTKEYVNSLKAEVEEL 193
           +P+ NQL HMISER+RREKLN+SF AL+++LPPGSKKDK S+L + +EYVNSLK++V EL
Sbjct: 238 QPSGNQLQHMISERKRREKLNDSFHALKTVLPPGSKKDKTSILITAREYVNSLKSKVCEL 297

Query: 194 RRKNQILEAQLLQNDDQELGQMITGTDSSTTDQRVVDVRITNIINAETTSSEAARILDLR 373
             KNQ+L+AQL Q  + +     TG D+ T     V++ IT     ++T+ +  ++  ++
Sbjct: 298 EEKNQVLQAQLAQRANSD----NTGEDAETKAGEKVEIEIT---RDDSTADQEDQVCTVK 350

Query: 374 VIV 382
           + V
Sbjct: 351 IAV 353


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