BLASTX nr result

ID: Panax21_contig00029436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029436
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-...    92   2e-16
ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [R...    91   5e-16
ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|2...    88   4e-15
ref|XP_003527169.1| PREDICTED: probable GMP synthase [glutamine-...    79   2e-12
ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12

>ref|XP_002276173.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing] [Vitis
           vinifera] gi|297743642|emb|CBI36525.3| unnamed protein
           product [Vitis vinifera]
          Length = 375

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 62/143 (43%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
 Frame = -1

Query: 421 ISGATKVRQMNVADSEARLVLGPTGNKEQRSSSAQKPVSKPSRKVDILSPEDVSLEEDKK 242
           +SG  +VR MNVADSE R VLGP GNK  RS S +KP +KP RK +  + +D    E+ K
Sbjct: 1   MSGGPRVRSMNVADSEVRPVLGPAGNKTMRSLSGRKPATKPLRKAEKATKDD----EEIK 56

Query: 241 PLLSSTVVASSLPPMHSMSVPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGRIC 62
            L SS   ASS PP HS+SVP +                               STGRI 
Sbjct: 57  ALPSSNGAASS-PPSHSVSVPLVLRRQEQLLHSNLSLNASCSSDASTDSFHSRASTGRIT 115

Query: 61  R---TSRRRQLTSKPKSVVADGV 2
           R   T+RRR   SKPK +V+DGV
Sbjct: 116 RSSSTARRRSYASKPKVIVSDGV 138


>ref|XP_002529378.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223531126|gb|EEF32974.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 380

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 62/143 (43%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
 Frame = -1

Query: 421 ISGATKVRQMNVADSEARLVLGPTGNKEQRSSSAQKPVSKPSRKVDILSPEDVSLEEDKK 242
           +SGA +VR MNVADSE R VLGPTGN +  S SA+KP SK  RKV+  SPE V L ++KK
Sbjct: 1   MSGAPRVRSMNVADSETRPVLGPTGNNKAGSLSAKKPASKQLRKVE-TSPEAVKLGQEKK 59

Query: 241 PLLSSTVVASSLPPMHSMSVPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGRIC 62
            +   T  A S P  HS+SVPS+                               STGR+ 
Sbjct: 60  LVTVPTASALS-PKSHSVSVPSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRLT 118

Query: 61  RT----SRRRQLTSKPKSVVADG 5
           R+    +RR+Q   KP+SVV+DG
Sbjct: 119 RSNSLGTRRKQYALKPRSVVSDG 141


>ref|XP_002324538.1| predicted protein [Populus trichocarpa] gi|222865972|gb|EEF03103.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 58/143 (40%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
 Frame = -1

Query: 421 ISGATKVRQMNVADSEARLVLGPTGNKEQRSSSAQKPVSKPSRKVDILSPEDVSLEEDKK 242
           +SGA +VR MNVADSEAR VLGPTGN +    SA+KPVSK SRKV+  SPE+V L E+KK
Sbjct: 1   MSGAPRVRSMNVADSEARSVLGPTGNNKAGPLSARKPVSKQSRKVE-KSPEEVKLGEEKK 59

Query: 241 PLLSSTVVASSLPPMHSMSVPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGRIC 62
             L+   V +  P  HS+++ S+                               STGR+ 
Sbjct: 60  -TLTVPAVGTLSPKSHSLNISSVLRRHELLLHSNLSLNASCSSDASTDSFHSRASTGRLT 118

Query: 61  RT----SRRRQLTSKPKSVVADG 5
           R+    +RR+Q   +P+S V++G
Sbjct: 119 RSNSAGTRRKQYVLRPRSFVSEG 141


>ref|XP_003527169.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Glycine max]
          Length = 383

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 59/145 (40%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
 Frame = -1

Query: 421 ISGATKVRQMNVADSEARLVLGPTGNKEQRSSSAQKPVSKPSR-KVDILSPEDVSLEEDK 245
           +SGA ++R MNVADSEAR VLGP GNK   S S++K  SKP R KVD L  E  S++E K
Sbjct: 1   MSGAPRLRSMNVADSEARPVLGPAGNK-TGSLSSRKTASKPLRKKVDKLLDEIASVKEKK 59

Query: 244 KPLLSSTVVASSLPPMHSMSVPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGRI 65
              +  + VA+S P  HS SV  +                               STGR+
Sbjct: 60  PHQVLLSSVATSSPQSHSASVSLLLPRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRL 119

Query: 64  CRT----SRRRQLTSKPKSVVADGV 2
            R+    SRR+   SKP+SV +DGV
Sbjct: 120 TRSYSLGSRRKPYVSKPRSVASDGV 144


>ref|XP_002309346.1| predicted protein [Populus trichocarpa] gi|222855322|gb|EEE92869.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 59/144 (40%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
 Frame = -1

Query: 421 ISGATKVRQMNVADSEARLVLGPTGN-KEQRSSSAQKPVSKPSRKVDILSPEDVSLEEDK 245
           +SGA +VR MNVADSEAR VLGPTGN K    +SA+KP SK  RK D  SPE+  L E+K
Sbjct: 1   MSGAPRVRSMNVADSEARPVLGPTGNTKAGPLTSARKPASKQLRK-DGKSPEEAKLGEEK 59

Query: 244 KPLLSSTVVASSLPPMHSMSVPSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGRI 65
           K +L+   V +  P   S +  S+                               STGR+
Sbjct: 60  K-VLTVPTVGNLSPKSLSGNFSSVLRRHEQLLHSNLSLNASCSSDASTDSFHSRASTGRL 118

Query: 64  CRT----SRRRQLTSKPKSVVADG 5
            R+    +RR+Q  SKP+SVV+DG
Sbjct: 119 IRSNNVGTRRKQYVSKPRSVVSDG 142


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