BLASTX nr result

ID: Panax21_contig00029427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029427
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform...   105   1e-20
sp|P25010.1|CCNAL_DAUCA RecName: Full=G2/mitotic-specific cyclin...    97   4e-18
dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]                    97   4e-18
dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]                    96   6e-18
emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]              96   7e-18

>ref|XP_002285074.2| PREDICTED: putative cyclin-A3-1-like isoform 1 [Vitis vinifera]
           gi|302142243|emb|CBI19446.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score =  105 bits (261), Expect = 1e-20
 Identities = 53/88 (60%), Positives = 60/88 (68%)
 Frame = -2

Query: 489 LERYIRIAQENPNTPYLQLEFLGYYLAELSLLDYGCIKFLPSLVAASVTFLSGFTIRPNV 310
           L R+ RIAQEN  TP LQLEFL YYLAELSLLDYGC+KFLPS+VAASV FLS FT+RP  
Sbjct: 235 LRRFTRIAQENYKTPNLQLEFLVYYLAELSLLDYGCVKFLPSMVAASVIFLSRFTLRPKT 294

Query: 309 HPWFHCCGYFMWYYPPM*SRAIQLIPSL 226
           HPW     +   Y P      + +I  L
Sbjct: 295 HPWCSSLQHHSGYKPSELKECVLIIHDL 322


>sp|P25010.1|CCNAL_DAUCA RecName: Full=G2/mitotic-specific cyclin C13-1; AltName:
           Full=A-like cyclin gi|829260|emb|CAA44631.1| mitotic
           cyclin [Daucus carota]
          Length = 341

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 4/70 (5%)
 Frame = -2

Query: 480 YIRIAQENPNTPYLQLEFLGYYLAELSLLDYGCIKFLPSLVAASVTFLSGFTIRPNVHPW 301
           +IR  QENP+ P L+ EFL  YLAELSLLDYGC++F+PSL+AASVTFL+ FTIRPNV+PW
Sbjct: 216 FIRAVQENPDVPKLKFEFLANYLAELSLLDYGCLEFVPSLIAASVTFLARFTIRPNVNPW 275

Query: 300 F----HCCGY 283
                 C GY
Sbjct: 276 SIALQKCSGY 285


>dbj|BAA20410.1| A-type cyclin [Catharanthus roseus]
          Length = 372

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 47/88 (53%), Positives = 57/88 (64%)
 Frame = -2

Query: 489 LERYIRIAQENPNTPYLQLEFLGYYLAELSLLDYGCIKFLPSLVAASVTFLSGFTIRPNV 310
           L R  R+ Q+    P LQ EFLGYYLAELSLLDYGC+KFLPSL+A+SV FLS FT++P V
Sbjct: 244 LRRLTRVVQDGDKNPNLQFEFLGYYLAELSLLDYGCVKFLPSLIASSVIFLSRFTLQPKV 303

Query: 309 HPWFHCCGYFMWYYPPM*SRAIQLIPSL 226
           HPW     +   Y P      + +I  L
Sbjct: 304 HPWNSLLQHNSGYKPADLKECVLIIHDL 331


>dbj|BAA20412.1| A-type cyclin [Catharanthus roseus]
          Length = 306

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = -2

Query: 489 LERYIRIAQENPNTPYLQLEFLGYYLAELSLLDYGCIKFLPSLVAASVTFLSGFTIRPNV 310
           L R  R+ Q+    P LQ EFLGYYLAELSLLDYGC+KFLPSL+A+SV FLS FT++P V
Sbjct: 244 LRRLTRVVQDGDKNPNLQFEFLGYYLAELSLLDYGCVKFLPSLIASSVIFLSRFTLQPKV 303

Query: 309 HPW 301
           HPW
Sbjct: 304 HPW 306


>emb|CAA63541.1| cyclin A-like protein [Nicotiana tabacum]
          Length = 384

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = -2

Query: 489 LERYIRIAQENPNTPYLQLEFLGYYLAELSLLDYGCIKFLPSLVAASVTFLSGFTIRPNV 310
           L R+  +AQE+  TP LQLEFLGYYLAELS+LDY C+K++PSL+AA+V FLS FT++PN 
Sbjct: 253 LRRFTGVAQEDYKTPNLQLEFLGYYLAELSILDYSCVKYVPSLLAAAVVFLSRFTLQPNT 312

Query: 309 HPW 301
           HPW
Sbjct: 313 HPW 315


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