BLASTX nr result

ID: Panax21_contig00029420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029420
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40419.3| unnamed protein product [Vitis vinifera]              215   2e-53
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]   212   1e-52
ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like...   192   1e-46
ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like...   191   3e-46

>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  215 bits (547), Expect = 2e-53
 Identities = 115/228 (50%), Positives = 146/228 (64%), Gaps = 3/228 (1%)
 Frame = +1

Query: 49  STKLLALPSKNKSNGLPHHPFPFSMS-LPFFTGSRNTTPTANAATVYGGAQPPPPPNHIT 225
           S K+  +PS + S   P+ P   S+S LP  T     TP++ A+     A  PPPP +++
Sbjct: 32  SKKISTIPSLSLSPLSPNGP---SLSTLPMSTTP--ITPSSYASAAAAAAAAPPPPTYLS 86

Query: 226 HLGLRYAIALASGILVIISVLFFASYVCCRLMXXXXXXXXXXXXXXXDN-GIIVPRVFFV 402
           +LGL YAIA+A   LV++S +  ASY+CCR                  + GI++PR+ FV
Sbjct: 87  NLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSRNPASAANSSDGIVLPRIIFV 146

Query: 403 AEDDDDSENVAVGLDQVVINSYPKFPFSRGMGN-DSACAICLCEYKDAEMLRMLPDCRHY 579
           AED+D+ +NV VGLDQ VI+SYPKFPFS+   + DS C+ICLCEYKD+EMLRMLPDCRH 
Sbjct: 147 AEDEDEDQNVVVGLDQAVIDSYPKFPFSKSNTHLDSVCSICLCEYKDSEMLRMLPDCRHC 206

Query: 580 FHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXXEVVPLSQYSDGRNRR 723
           FHL C+DAWLKLNASCPVCRN            E+VPLSQY   R RR
Sbjct: 207 FHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVPLSQYPADRRRR 254


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score =  212 bits (539), Expect = 1e-52
 Identities = 103/191 (53%), Positives = 129/191 (67%), Gaps = 2/191 (1%)
 Frame = +1

Query: 157 TPTANAATVYGGAQPPPPPNHITHLGLRYAIALASGILVIISVLFFASYVCCRLMXXXXX 336
           TP++ A+     A  PPPP ++++LGL YAIA+A   LV++S +  ASY+CCR       
Sbjct: 7   TPSSYASAAAAAAAAPPPPTYLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPH 66

Query: 337 XXXXXXXXXXDN-GIIVPRVFFVAEDDDDSENVAVGLDQVVINSYPKFPFSRGMGN-DSA 510
                      + GI++PR+ FVAED+D+ +NV VGLDQ VI+SYPKFPFS+   + DS 
Sbjct: 67  HSRNPASAANSSDGIVLPRIIFVAEDEDEDQNVVVGLDQAVIDSYPKFPFSKSNTHLDSV 126

Query: 511 CAICLCEYKDAEMLRMLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXXEVVP 690
           C+ICLCEYKD+EMLRMLPDCRH FHL C+DAWLKLNASCPVCRN            E+VP
Sbjct: 127 CSICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRNSPLPTPLSTPLSELVP 186

Query: 691 LSQYSDGRNRR 723
           LSQY   R RR
Sbjct: 187 LSQYPADRRRR 197


>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  202 bits (514), Expect = 1e-49
 Identities = 103/204 (50%), Positives = 127/204 (62%), Gaps = 14/204 (6%)
 Frame = +1

Query: 154 TTPTANAATVYGGAQPPPPPNHITHLGLRYAIALASGILVIISVLFFASYVCCRLMXXXX 333
           +TPT    +      PPPP N++T+LGL Y+IA+A   LV++S +  ASY+CCR      
Sbjct: 2   STPTTTIPSTISATSPPPPANYLTNLGLGYSIAIALFFLVLLSTILLASYICCRTNRHRS 61

Query: 334 XXXXXXXXXXXDN---GIIVPRVFFVAEDDD----DSENVAVGLDQVVINSYPKFPFSRG 492
                      ++   GII+PR+ FVAEDD+    D E+ AVGL+Q VINSYPKF FS+ 
Sbjct: 62  RNSNNNNNNYANSTADGIILPRIIFVAEDDEEQERDLESAAVGLNQAVINSYPKFQFSKD 121

Query: 493 MGND-------SACAICLCEYKDAEMLRMLPDCRHYFHLTCIDAWLKLNASCPVCRNXXX 651
            G         + C+ICLCEYKD EMLRM+PDCRHYFHL C+DAWLKLN SCPVCRN   
Sbjct: 122 GGFSERTNNFCNTCSICLCEYKDLEMLRMMPDCRHYFHLLCLDAWLKLNGSCPVCRNSPL 181

Query: 652 XXXXXXXXXEVVPLSQYSDGRNRR 723
                    EVVPLSQY+  R RR
Sbjct: 182 PTPLSTPLSEVVPLSQYAADRRRR 205


>ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 184

 Score =  192 bits (488), Expect = 1e-46
 Identities = 93/180 (51%), Positives = 116/180 (64%), Gaps = 5/180 (2%)
 Frame = +1

Query: 202 PPPPNHITHLGLRYAIALASGILVIISVLFFASYVCCRLMXXXXXXXXXXXXXXXDNGII 381
           P  P+H  HLGL Y+IA+A   L ++S L  +SY+CCR                 D GI+
Sbjct: 7   PSSPDHFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCR--HNRRRLRHTTAAATSDGGIV 64

Query: 382 VPRVFFVAEDDDDSENVAVGLDQVVINSYPKFPFSRGMGNDS-----ACAICLCEYKDAE 546
           +PRV FVAED+D+  +VAVG DQ VINSYP+F F+R    ++      C+ICLCEYKD+E
Sbjct: 65  LPRVIFVAEDEDEDGSVAVGFDQSVINSYPRFQFNRDNARNNNIINTTCSICLCEYKDSE 124

Query: 547 MLRMLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXXEVVPLSQYSDGRNRRR 726
           MLRM+P+CRHYFHL C+D+WLKLN SCPVCRN            EVVPLSQY+  R R R
Sbjct: 125 MLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRNR 184


>ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]
           gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2
           finger protein ATL67-like [Cucumis sativus]
          Length = 184

 Score =  191 bits (484), Expect = 3e-46
 Identities = 98/181 (54%), Positives = 112/181 (61%), Gaps = 7/181 (3%)
 Frame = +1

Query: 202 PPPPNHITHLGLRYAIALASGILVIISVLFFASYVCCRLMXXXXXXXXXXXXXXXDNGII 381
           P      + +GL Y+IA+A   LV++S L  A YVCCR                 D GII
Sbjct: 4   PSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPPPPSSRSDAGII 63

Query: 382 VPRVFFVAEDDD----DSENVAVGLDQVVINSYPKFPFSRGM---GNDSACAICLCEYKD 540
           +P++ FVAEDD     D +N  VGLDQ VINSYPKFPFSR     G +  C+ICLCEYKD
Sbjct: 64  LPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLCEYKD 123

Query: 541 AEMLRMLPDCRHYFHLTCIDAWLKLNASCPVCRNXXXXXXXXXXXXEVVPLSQYSDGRNR 720
           AEMLRM+P+CRHYFHL CIDAWLKLN SCPVCRN            EVVPLSQY   R R
Sbjct: 124 AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRR 183

Query: 721 R 723
           R
Sbjct: 184 R 184


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