BLASTX nr result

ID: Panax21_contig00029375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029375
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517744.1| conserved hypothetical protein [Ricinus comm...    86   2e-15
emb|CBI15857.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002277024.1| PREDICTED: protein LURP-one-related 7-like [...    83   2e-14
ref|XP_002325662.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
gb|AER92596.1| hypothetical protein [Linum usitatissimum]              79   4e-13

>ref|XP_002517744.1| conserved hypothetical protein [Ricinus communis]
           gi|223543142|gb|EEF44676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 158

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/108 (40%), Positives = 72/108 (66%), Gaps = 4/108 (3%)
 Frame = -2

Query: 331 EIPVDYFVSKKKEKNGSGDIGNLQFLDASSNLVFG----ANKVCTPYNRRLLIDASGNLL 164
           +IP+D F+SKK      G++G   F D+S NLVF     ++K C+  ++ +++D S N +
Sbjct: 24  QIPMDLFISKKHPDLAHGELG---FADSSGNLVFRTKYISSKRCSS-SKWVILDKSRNPI 79

Query: 163 ISLHRNQNGSWHGFRRDANGLDKLIFRAERTLNTFNKTEFEIFLVNED 20
           IS++R +NG WHGF+ D+ G +++ F+ +RTLN   +TE E+FLV E+
Sbjct: 80  ISIYRQKNGYWHGFKGDSEGENQMTFKVQRTLNKIFRTELEVFLVKEN 127


>emb|CBI15857.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/122 (42%), Positives = 72/122 (59%)
 Frame = -2

Query: 373 ILMDLELLLNQANVEIPVDYFVSKKKEKNGSGDIGNLQFLDASSNLVFGANKVCTPYNRR 194
           I M    L   ++ +IP D F+SKK      G +G     D+S  +V+  N+  +P + R
Sbjct: 232 ISMASSALAYPSDFQIPFDLFISKKHPGLPRGYLG---LADSSGTIVYRVNRR-SPKHNR 287

Query: 193 LLIDASGNLLISLHRNQNGSWHGFRRDANGLDKLIFRAERTLNTFNKTEFEIFLVNEDFE 14
           +L+DA+GN LIS+  + +GSW  FR D +G D LIFR ERTLNT  +TEF IFL   + E
Sbjct: 288 VLLDAAGNPLISMRGSHDGSWQCFRGDGSGED-LIFRVERTLNTLTRTEFNIFLGGANCE 346

Query: 13  VS 8
            S
Sbjct: 347 DS 348


>ref|XP_002277024.1| PREDICTED: protein LURP-one-related 7-like [Vitis vinifera]
          Length = 186

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/111 (44%), Positives = 69/111 (62%)
 Frame = -2

Query: 340 ANVEIPVDYFVSKKKEKNGSGDIGNLQFLDASSNLVFGANKVCTPYNRRLLIDASGNLLI 161
           ++ +IP D F+SKK      G +G     D+S  +V+  N+  +P + R+L+DA+GN LI
Sbjct: 10  SDFQIPFDLFISKKHPGLPRGYLG---LADSSGTIVYRVNRR-SPKHNRVLLDAAGNPLI 65

Query: 160 SLHRNQNGSWHGFRRDANGLDKLIFRAERTLNTFNKTEFEIFLVNEDFEVS 8
           S+  + +GSW  FR D +G D LIFR ERTLNT  +TEF IFL   + E S
Sbjct: 66  SMRGSHDGSWQCFRGDGSGED-LIFRVERTLNTLTRTEFNIFLGGANCEDS 115


>ref|XP_002325662.1| predicted protein [Populus trichocarpa] gi|222862537|gb|EEF00044.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
 Frame = -2

Query: 328 IPVDYFVSKKKEKNGSGDIGNLQFLDASSNLVFGAN--KVCTPYNRRLLIDASGNLLISL 155
           IPVD FVSKK      G  G+L F D+  N+VF  N  K      +R+L+DASGN LI++
Sbjct: 1   IPVDLFVSKKHP----GLNGDLGFADSLGNIVFKVNFDKSSKSSFKRVLLDASGNPLITV 56

Query: 154 HRNQNGSWHGFRRDANGLDKLIFRAERTLNTFNKTEFEIFLVNEDFEVSKP 2
            R+  GSW GF+   N    LIFR +RT+    +TE E+FLV E    S P
Sbjct: 57  FRDGKGSWQGFKGGDNREKDLIFRVKRTVKKLTRTELEVFLVGEISRESTP 107


>gb|AER92596.1| hypothetical protein [Linum usitatissimum]
          Length = 195

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/114 (38%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
 Frame = -2

Query: 346 NQANVEIPVDYFVSKKKEKNGSGDIGNLQFLDASSNLVFGANKVCTP------YNRRLLI 185
           N A  +IPVD FVSK       G++G   F D+S  L+F    + +P       +++L++
Sbjct: 13  NAAASQIPVDLFVSKNHPGVPQGNLG---FADSSGELLFRVAPLPSPKAWKSRQSKKLIL 69

Query: 184 DASGNLLISLHRNQNGSWHGFRRDANGLDKLIFRAERTLNTFNKTEFEIFLVNE 23
           ++SG+ LISLHR   GSW GF    +   +++FR +RT+N   +TEFE+FL  E
Sbjct: 70  NSSGSPLISLHRLDKGSWEGFEGGEDTEKEMLFRVQRTVNKLCRTEFEVFLAGE 123


Top