BLASTX nr result

ID: Panax21_contig00029374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029374
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519272.1| conserved hypothetical protein [Ricinus comm...   115   3e-24
ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vit...   115   4e-24
ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Gly...   114   8e-24
ref|XP_002316055.1| f-box family protein [Populus trichocarpa] g...   112   3e-23
gb|AFK41573.1| unknown [Lotus japonicus]                              112   4e-23

>ref|XP_002519272.1| conserved hypothetical protein [Ricinus communis]
           gi|223541587|gb|EEF43136.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score =  115 bits (289), Expect = 3e-24
 Identities = 51/72 (70%), Positives = 63/72 (87%)
 Frame = -3

Query: 220 GFFPDEVILQILARLPMKSLFRTKCVCKLWYKLVSDKYFIQLYNEMFVRNPMVLIEVTES 41
           G  PDE++LQILARLP+KSLFR K VCKLWY+L  DKYFIQLYNE+  RNPMVL+E+++S
Sbjct: 6   GILPDEIVLQILARLPVKSLFRAKTVCKLWYRLSLDKYFIQLYNEVAARNPMVLVEISDS 65

Query: 40  SHSRSSLICVDN 5
           S S+SSL+C+DN
Sbjct: 66  SESKSSLLCIDN 77


>ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
          Length = 357

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/72 (72%), Positives = 65/72 (90%)
 Frame = -3

Query: 220 GFFPDEVILQILARLPMKSLFRTKCVCKLWYKLVSDKYFIQLYNEMFVRNPMVLIEVTES 41
           G FP+EVILQILARLP+KS+FR+KCVC LWYKL SDKYF++LYN+++V+ P+VLIEVT+S
Sbjct: 4   GVFPEEVILQILARLPVKSVFRSKCVCTLWYKLCSDKYFVRLYNQVWVKKPVVLIEVTDS 63

Query: 40  SHSRSSLICVDN 5
              +SSLICVDN
Sbjct: 64  LECKSSLICVDN 75


>ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like [Glycine max]
          Length = 372

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/72 (70%), Positives = 64/72 (88%)
 Frame = -3

Query: 220 GFFPDEVILQILARLPMKSLFRTKCVCKLWYKLVSDKYFIQLYNEMFVRNPMVLIEVTES 41
           G FPDEV++QILARLP+KSLFR K VCKLWY+L  DKYFIQLYNE+  +NPM+L+E+++S
Sbjct: 19  GIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISDS 78

Query: 40  SHSRSSLICVDN 5
           S S++SLICVDN
Sbjct: 79  SESKTSLICVDN 90


>ref|XP_002316055.1| f-box family protein [Populus trichocarpa]
           gi|222865095|gb|EEF02226.1| f-box family protein
           [Populus trichocarpa]
          Length = 359

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/72 (70%), Positives = 61/72 (84%)
 Frame = -3

Query: 220 GFFPDEVILQILARLPMKSLFRTKCVCKLWYKLVSDKYFIQLYNEMFVRNPMVLIEVTES 41
           GF PDEVI+Q+LARLP+KSLFR K VCKLWYKL SDKYF+QLYNE+  +N MVL+EV++S
Sbjct: 6   GFLPDEVIIQVLARLPVKSLFRAKTVCKLWYKLSSDKYFVQLYNEVATKNSMVLVEVSDS 65

Query: 40  SHSRSSLICVDN 5
              +SSLIC DN
Sbjct: 66  PELKSSLICADN 77


>gb|AFK41573.1| unknown [Lotus japonicus]
          Length = 360

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/72 (68%), Positives = 65/72 (90%)
 Frame = -3

Query: 220 GFFPDEVILQILARLPMKSLFRTKCVCKLWYKLVSDKYFIQLYNEMFVRNPMVLIEVTES 41
           G FPDEV++QILARLP+KSLFR+K VCKLW +L SDKYF+QLYNE+  +NPM+L+E++++
Sbjct: 7   GIFPDEVVMQILARLPVKSLFRSKTVCKLWCRLSSDKYFVQLYNEVSRKNPMILVEISDT 66

Query: 40  SHSRSSLICVDN 5
           S S+SSLICVD+
Sbjct: 67  SESKSSLICVDS 78


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