BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029362
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    68   1e-12
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    72   3e-12
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-11
ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arab...    64   3e-11
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-11

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 68.2 bits (165), Expect(2) = 1e-12
 Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
 Frame = -1

Query: 324  VPRFSFILWLGFLRKLPTNDITRHYLSGRSSSCPLCQRHDESFDHLFFECPYSSSILQKT 145
            +P+++F  W+  L +LP    T H+ + R S C +CQR  E+ DHLF  C   S I Q+ 
Sbjct: 1061 IPKYAFNFWVAHLNRLPVRARTTHWSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQV 1120

Query: 144  LELGDWSNVPMDWTGVSSFIISFQG---GKLSKLILYLTFTATFYKIWEAR 1
            L     S +  +W  +  +++S QG   G L KL +    TA F+ IW+ R
Sbjct: 1121 LARFGRSQMFREWKDIIEWMLSNQGSFSGTLKKLAVQ---TAIFH-IWKER 1167



 Score = 29.3 bits (64), Expect(2) = 1e-12
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 392  WDCIRTKKSTLMWHKIVWHK 333
            W+C+R + +T +W   VW+K
Sbjct: 1039 WECLRQRDTTKLWAAAVWYK 1058


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 72.4 bits (176), Expect(2) = 3e-12
 Identities = 39/112 (34%), Positives = 56/112 (50%)
 Frame = -1

Query: 336  QATHVPRFSFILWLGFLRKLPTNDITRHYLSGRSSSCPLCQRHDESFDHLFFECPYSSSI 157
            QAT  P+FSF +WL  L +L T D   ++    S SC  C    +S DHLFF CPYSS +
Sbjct: 1288 QAT--PKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTKSRDHLFFNCPYSSEV 1345

Query: 156  LQKTLELGDWSNVPMDWTGVSSFIISFQGGKLSKLILYLTFTATFYKIWEAR 1
               T +    +    DW  + + + S Q  ++   ++   F A+ Y IW  R
Sbjct: 1346 WTVTAKNILTTRFTTDWHLLLNTVSSLQQNRVENFLVRYAFQASVYSIWSER 1397



 Score = 23.9 bits (50), Expect(2) = 3e-12
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 392  WDCIRTKKSTLMWHKIVW 339
            W+ IRT  + + W+K VW
Sbjct: 1268 WNNIRTTATKVTWYKGVW 1285


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 67.4 bits (163), Expect(2) = 2e-11
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = -1

Query: 324 VPRFSFILWLGFLRKLPTNDITRHYLSGRSSSCPLCQRHDESFDHLFFECPYSSSILQKT 145
           VPR SF+LW+   +KL T D    +     + C LC R++E  +HLFFEC Y+ +I    
Sbjct: 352 VPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDV 411

Query: 144 LELGDWSNVPMDW-TGVSSFIISFQGGKLSKLILYLTFTATFYKIWEAR 1
            +  D   +   W   +    +S+ G         L+F AT Y +W+ R
Sbjct: 412 CDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQER 460



 Score = 26.2 bits (56), Expect(2) = 2e-11
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 392 WDCIRTKKSTLMWHKIVWHK 333
           W+ +R  +  + WH IVW K
Sbjct: 330 WEQLRRHRQMVEWHDIVWFK 349


>ref|XP_002865536.1| hypothetical protein ARALYDRAFT_917542 [Arabidopsis lyrata subsp.
           lyrata] gi|297311371|gb|EFH41795.1| hypothetical protein
           ARALYDRAFT_917542 [Arabidopsis lyrata subsp. lyrata]
          Length = 227

 Score = 63.5 bits (153), Expect(2) = 3e-11
 Identities = 37/106 (34%), Positives = 52/106 (49%)
 Frame = -1

Query: 324 VPRFSFILWLGFLRKLPTNDITRHYLSGRSSSCPLCQRHDESFDHLFFECPYSSSILQKT 145
           VPR+SFI+WL    +L T   TR    G    C  C+  DES DHLFF CP++ SI  + 
Sbjct: 91  VPRYSFIVWLAVKDQLSTG--TRMRAWGVEQPCVFCRERDESRDHLFFACPFTYSIWSEL 148

Query: 144 LELGDWSNVPMDWTGVSSFIISFQGGKLSKLILYLTFTATFYKIWE 7
                   +  DW+     + S Q  K  + +L + F  T Y +W+
Sbjct: 149 TSRLLRRKLNPDWSRTLLSLRSPQLTKRDQNLLCMIFQTTLYMVWK 194



 Score = 29.3 bits (64), Expect(2) = 3e-11
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 404 AQHVWDCIRTKKSTLMWHKIVW 339
           ++H W+ +R  K  ++WH  VW
Sbjct: 65  SRHTWNLLRKAKHKVLWHNSVW 86


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 66.2 bits (160), Expect(2) = 4e-11
 Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = -1

Query: 324  VPRFSFILWLGFLRKLPTNDITRHYLSGRSSSCPLCQRHDESFDHLFFECPYSSSILQKT 145
            VPR SF+LW+   +KL T D    +     + C LC R++E  +HLFFEC Y+ +I    
Sbjct: 1225 VPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIWWDV 1284

Query: 144  LELGDWSNVPMDW-TGVSSFIISFQGGKLSKLILYLTFTATFYKIWEAR 1
             +  D   +   W   +    +S+ G         L+F AT Y +W+ R
Sbjct: 1285 CDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSFAATVYHVWQER 1333



 Score = 26.2 bits (56), Expect(2) = 4e-11
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 392  WDCIRTKKSTLMWHKIVWHK 333
            W+ +R  +  + WH IVW K
Sbjct: 1203 WEHLRRHRQMVEWHDIVWFK 1222