BLASTX nr result

ID: Panax21_contig00029349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029349
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438922.1| hypothetical protein SORBIDRAFT_10g028330 [S...    56   6e-06
gb|ABD63183.1| hypothetical protein 20.t00035 [Asparagus officin...    56   8e-06

>ref|XP_002438922.1| hypothetical protein SORBIDRAFT_10g028330 [Sorghum bicolor]
           gi|241917145|gb|EER90289.1| hypothetical protein
           SORBIDRAFT_10g028330 [Sorghum bicolor]
          Length = 596

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 30/82 (36%), Positives = 42/82 (51%)
 Frame = +2

Query: 299 MAVTMTILEKGVRFPLHAFIVTILGFLGVGFAQLMSNSYIHILAFIALCHELGVEPTLDF 478
           M V    LE G+RFPLH F V +L    +  +QL  N++ ++ AF+ LC + GVEP +  
Sbjct: 93  MCVYAAALEAGLRFPLHGFYVRVLRHYCLAPSQLTPNAWTYLAAFVLLCEDAGVEPLVSA 152

Query: 479 FFTVYKVNQSREKGFKTISKHF 544
           F   + V   R  G      HF
Sbjct: 153 FRYFFTVCAHRHDGKPLGCHHF 174


>gb|ABD63183.1| hypothetical protein 20.t00035 [Asparagus officinalis]
          Length = 210

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 35/97 (36%), Positives = 52/97 (53%)
 Frame = +2

Query: 182 SKVTEIDLKKL*TRCHIPDTHLVRAPRSEERMYQRPERWMAVTMTILEKGVRFPLHAFIV 361
           SKV   +L  L  + +I  T  + AP   E +Y   E  + + +  LE G+R PLH FI 
Sbjct: 23  SKVHMDNLLGLYDQYNISQTLTLVAPEISEPVYCHGEDQVPLYLAHLEHGLRLPLHPFIK 82

Query: 362 TILGFLGVGFAQLMSNSYIHILAFIALCHELGVEPTL 472
            +   LGV   Q   N+   ++AFI +CH +GV+P+L
Sbjct: 83  EVHTALGVSPFQFYPNTVGILVAFIIICHRVGVQPSL 119


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