BLASTX nr result

ID: Panax21_contig00029286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029286
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]   167   1e-39
ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
emb|CBI28241.3| unnamed protein product [Vitis vinifera]              148   4e-34
ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800...   147   9e-34

>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/155 (53%), Positives = 106/155 (68%)
 Frame = +2

Query: 2   GICPVSRRNNQDNNQLTPYTTFKTDGTAIGTDHPPRKCYRITPRSTYLPFDQDCCSHEIA 181
           GICPVSRRN Q+ NQLTPYT     G    +   P++ YR TP S  +PFDQD C+ EIA
Sbjct: 430 GICPVSRRN-QEKNQLTPYTPASQAGFTGNSTDAPKRRYRGTPVSANIPFDQDRCNQEIA 488

Query: 182 KMIILHEYPLNIVEHPGFIDFVRILQPQFHMVNINIVEEECVSIYLREKQXXXXXXXXXX 361
           KMII+HEYPL+IVEH GFI+FV  LQPQF+MV+ N ++ +CV+++LREKQ          
Sbjct: 489 KMIIMHEYPLHIVEHSGFINFVHTLQPQFNMVSFNSIQGDCVALFLREKQNLSNTLNGIP 548

Query: 362 XXXXXTLDLLTSDQGLSYLLLTGCFIDHDWKLQQR 466
                TLD+ TSD+ L Y+ LTG FID +WKL ++
Sbjct: 549 GRVSLTLDMWTSDENLGYVFLTGHFIDGEWKLHRQ 583


>ref|XP_002327524.1| predicted protein [Populus trichocarpa] gi|222836078|gb|EEE74499.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  150 bits (380), Expect = 8e-35
 Identities = 77/155 (49%), Positives = 99/155 (63%)
 Frame = +2

Query: 2   GICPVSRRNNQDNNQLTPYTTFKTDGTAIGTDHPPRKCYRITPRSTYLPFDQDCCSHEIA 181
           GICPVSR+ N+ +    PYT     G       PP+K +R +P  + +P DQD C+HEIA
Sbjct: 55  GICPVSRQKNESS----PYTPGLKTG-------PPKKRFRASPGFSAIPLDQDRCNHEIA 103

Query: 182 KMIILHEYPLNIVEHPGFIDFVRILQPQFHMVNINIVEEECVSIYLREKQXXXXXXXXXX 361
           KMII H+YPL+IVEHP FIDFVR LQP ++M+N+N ++ ECV++YLREKQ          
Sbjct: 104 KMIIQHDYPLHIVEHPAFIDFVRTLQPHYNMMNLNTIQGECVAVYLREKQSLLNLIGGIP 163

Query: 362 XXXXXTLDLLTSDQGLSYLLLTGCFIDHDWKLQQR 466
                TL L TS+  + Y  LTG F+D DW LQQR
Sbjct: 164 GRVNLTLYLGTSNLDIGYAFLTGHFVDGDWNLQQR 198


>ref|XP_002329012.1| predicted protein [Populus trichocarpa] gi|222839683|gb|EEE78006.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  150 bits (378), Expect = 1e-34
 Identities = 79/156 (50%), Positives = 99/156 (63%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   GICPVSRRNNQDNNQLTPYTT-FKTDGTAIGTDHPPRKCYRITPRSTYLPFDQDCCSHEI 178
           GICPVSR+ N+ +    PYT   KTD        PP+K +R +P  + +P DQD C+HEI
Sbjct: 87  GICPVSRQKNESS----PYTPGSKTD--------PPKKRFRASPGFSGIPLDQDRCNHEI 134

Query: 179 AKMIILHEYPLNIVEHPGFIDFVRILQPQFHMVNINIVEEECVSIYLREKQXXXXXXXXX 358
           AKMII H+YPL+IVEHPGFIDFVR LQP ++MV+ N ++ ECV +YLREKQ         
Sbjct: 135 AKMIIQHDYPLHIVEHPGFIDFVRTLQPHYNMVSFNTIQGECVDVYLREKQRLLNLISGI 194

Query: 359 XXXXXXTLDLLTSDQGLSYLLLTGCFIDHDWKLQQR 466
                 TLD   S+  + Y  LTG FID DW LQ+R
Sbjct: 195 PGRVNLTLDFGISNLDIGYAFLTGHFIDGDWNLQRR 230


>emb|CBI28241.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  148 bits (374), Expect = 4e-34
 Identities = 76/155 (49%), Positives = 101/155 (65%)
 Frame = +2

Query: 2   GICPVSRRNNQDNNQLTPYTTFKTDGTAIGTDHPPRKCYRITPRSTYLPFDQDCCSHEIA 181
           G C +  RN Q+ NQL+PY+     G A     PP++ YR +  ++ +PFDQD C HEIA
Sbjct: 156 GTCTLILRN-QEKNQLSPYSAPSKMGGAGSASEPPKRRYRTSSLAS-VPFDQDRCRHEIA 213

Query: 182 KMIILHEYPLNIVEHPGFIDFVRILQPQFHMVNINIVEEECVSIYLREKQXXXXXXXXXX 361
           +MII+H+YPL++VEHPGF+ FV+ LQP+F MV+ N V+ +CV+ YLREKQ          
Sbjct: 214 RMIIMHDYPLHMVEHPGFVAFVQNLQPRFDMVSFNTVQGDCVATYLREKQSLLKFIEGIP 273

Query: 362 XXXXXTLDLLTSDQGLSYLLLTGCFIDHDWKLQQR 466
                TLDL TS Q + Y+ LTG FID DWKL +R
Sbjct: 274 GRICLTLDLWTSRQSVGYVFLTGHFIDMDWKLHRR 308


>ref|XP_003541477.1| PREDICTED: uncharacterized protein LOC100800468 [Glycine max]
          Length = 1100

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/156 (47%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   GICPVSRRNNQDNNQLTPYTTFKTDGTAIGT-DHPPRKCYRITPRSTYLPFDQDCCSHEI 178
           G CP   R  QD NQ +PYT       A G     P++ YR +P + Y+ FDQD C HEI
Sbjct: 504 GTCPALLRG-QDQNQFSPYTPRSRGSDAAGNASSAPKRRYR-SPNTPYIIFDQDRCRHEI 561

Query: 179 AKMIILHEYPLNIVEHPGFIDFVRILQPQFHMVNINIVEEECVSIYLREKQXXXXXXXXX 358
           A+MII+H+YPL++VEHPGF+ FV+ LQPQF+MV  N ++ +CV+ YL EKQ         
Sbjct: 562 ARMIIMHDYPLHMVEHPGFVAFVQNLQPQFNMVTFNTIQGDCVATYLMEKQCVMKYFDGL 621

Query: 359 XXXXXXTLDLLTSDQGLSYLLLTGCFIDHDWKLQQR 466
                 TLD+ TS Q + Y+ +TG F+D DWKLQ+R
Sbjct: 622 PGRVCLTLDVWTSSQSVGYVFITGHFVDSDWKLQRR 657


Top