BLASTX nr result

ID: Panax21_contig00029281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029281
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159841.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ...   124   1e-26
ref|XP_004134170.1| PREDICTED: putative E3 ubiquitin-protein lig...   124   1e-26
ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein lig...   122   2e-26
ref|XP_002314433.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002516824.1| conserved hypothetical protein [Ricinus comm...   122   4e-26

>ref|XP_004159841.1| PREDICTED: LOW QUALITY PROTEIN: putative E3 ubiquitin-protein ligase
            RF298-like [Cucumis sativus]
          Length = 901

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/65 (89%), Positives = 59/65 (90%)
 Frame = -2

Query: 429  GNGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRGLIQQRICV 250
            G GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCR  IQ+RI V
Sbjct: 837  GTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPV 896

Query: 249  VYASS 235
             YA S
Sbjct: 897  RYARS 901


>ref|XP_004134170.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Cucumis
            sativus]
          Length = 901

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/65 (89%), Positives = 59/65 (90%)
 Frame = -2

Query: 429  GNGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRGLIQQRICV 250
            G GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCR  IQ+RI V
Sbjct: 837  GTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIPV 896

Query: 249  VYASS 235
             YA S
Sbjct: 897  RYARS 901


>ref|XP_002277269.1| PREDICTED: putative E3 ubiquitin-protein ligase RF298-like [Vitis
            vinifera]
          Length = 893

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/63 (88%), Positives = 59/63 (93%)
 Frame = -2

Query: 429  GNGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRGLIQQRICV 250
            G+GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCR  IQ+RI +
Sbjct: 829  GSGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRSPIQRRIRI 888

Query: 249  VYA 241
             YA
Sbjct: 889  RYA 891


>ref|XP_002314433.1| predicted protein [Populus trichocarpa] gi|222863473|gb|EEF00604.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/63 (92%), Positives = 58/63 (92%)
 Frame = -2

Query: 423 GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRGLIQQRICVVY 244
           GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRG IQ RI V Y
Sbjct: 674 GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRGPIQLRIPVRY 733

Query: 243 ASS 235
           A S
Sbjct: 734 ARS 736


>ref|XP_002516824.1| conserved hypothetical protein [Ricinus communis]
            gi|223543912|gb|EEF45438.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 894

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/63 (88%), Positives = 58/63 (92%)
 Frame = -2

Query: 423  GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGMKDCPSCRGLIQQRICVVY 244
            GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCN+LHEKQGMKDCPSCR  IQ+RI V Y
Sbjct: 832  GGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNDLHEKQGMKDCPSCRSTIQRRISVRY 891

Query: 243  ASS 235
            A S
Sbjct: 892  ARS 894


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