BLASTX nr result

ID: Panax21_contig00029267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029267
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur...    67   1e-09
ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit R...    59   5e-07

>ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
           [Ricinus communis] gi|223547839|gb|EEF49331.1|
           ubiquinol-cytochrome C reductase iron-sulfur subunit,
           putative [Ricinus communis]
          Length = 280

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
 Frame = -3

Query: 267 MLRVAGRRLSSVSS----WRPSQTAAASTFSKNPINTAXXXXXXXXXXXXSTAFFSNSFP 100
           MLRVA RRLSS+ S    WRP+Q A ++  S+NPIN                 +F+    
Sbjct: 1   MLRVAARRLSSLCSTQPSWRPNQAATSAIASRNPINGGDSSSSDDVKSKVLNDYFA---- 56

Query: 99  LMHHQFHIPSRGFASDVLISKNDNSI---IPATVAA 1
               QFHIP RGF+SD L+ KN++ I   +PATVAA
Sbjct: 57  -FRPQFHIPHRGFSSDSLMPKNEDGIVSEVPATVAA 91


>ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
           [Vitis vinifera]
          Length = 274

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 43/96 (44%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
 Frame = -3

Query: 267 MLRVAGRRLSSVSS----WRPSQTAAASTFSKNPINTAXXXXXXXXXXXXSTAFFSNSFP 100
           MLRVA RRLSS++S    WRP+Q A+A   S NPIN                  FS+SF 
Sbjct: 1   MLRVASRRLSSLTSSSSLWRPNQVASAVVTS-NPINPDEQPKPTR---------FSDSFS 50

Query: 99  LMHHQFHIPSRGFASDVLISKNDNSII---PATVAA 1
               QFH+P RGFAS+ L  +N++ +I   P TVAA
Sbjct: 51  FAS-QFHLPFRGFASESLTPRNESGVIPDAPPTVAA 85


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