BLASTX nr result

ID: Panax21_contig00029237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029237
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32371.3| unnamed protein product [Vitis vinifera]              293   1e-77
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   293   1e-77
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   290   6e-77
ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|2...   289   2e-76
ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   287   7e-76

>emb|CBI32371.3| unnamed protein product [Vitis vinifera]
          Length = 922

 Score =  293 bits (749), Expect = 1e-77
 Identities = 143/155 (92%), Positives = 150/155 (96%)
 Frame = +1

Query: 1    RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 180
            RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA
Sbjct: 765  RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 824

Query: 181  AQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIARDF 360
            AQCVGRVIRSKADYGMMIFADKRY+RHDKRSKLPGWILSHLR+AHLNLSTDMA+HIAR+F
Sbjct: 825  AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 884

Query: 361  LRKMAQPYDKTGGSGKKTLLSQEDLEKMGNGNNGE 465
            LRKMAQPYDK G SG+KTLLS+EDLEKMG+G   E
Sbjct: 885  LRKMAQPYDKAGVSGRKTLLSEEDLEKMGDGTTNE 919


>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  293 bits (749), Expect = 1e-77
 Identities = 143/155 (92%), Positives = 150/155 (96%)
 Frame = +1

Query: 1    RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 180
            RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA
Sbjct: 601  RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 660

Query: 181  AQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIARDF 360
            AQCVGRVIRSKADYGMMIFADKRY+RHDKRSKLPGWILSHLR+AHLNLSTDMA+HIAR+F
Sbjct: 661  AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 720

Query: 361  LRKMAQPYDKTGGSGKKTLLSQEDLEKMGNGNNGE 465
            LRKMAQPYDK G SG+KTLLS+EDLEKMG+G   E
Sbjct: 721  LRKMAQPYDKAGVSGRKTLLSEEDLEKMGDGTTNE 755


>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
            [Cucumis sativus]
          Length = 919

 Score =  290 bits (743), Expect = 6e-77
 Identities = 142/155 (91%), Positives = 148/155 (95%)
 Frame = +1

Query: 1    RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 180
            RGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLRETFQIKEGDFLTFDALRQA
Sbjct: 762  RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRETFQIKEGDFLTFDALRQA 821

Query: 181  AQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIARDF 360
            AQCVGRVIRSKADYGMMIFADKRY+RHDKRSKLPGWILSHLR+AHLNLSTDMA+HIAR+F
Sbjct: 822  AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 881

Query: 361  LRKMAQPYDKTGGSGKKTLLSQEDLEKMGNGNNGE 465
            LRKMAQPYDK G SG+KTLLSQEDLEKM   N  E
Sbjct: 882  LRKMAQPYDKAGSSGRKTLLSQEDLEKMSEANMNE 916


>ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|222842578|gb|EEE80125.1|
            predicted protein [Populus trichocarpa]
          Length = 758

 Score =  289 bits (739), Expect = 2e-76
 Identities = 141/148 (95%), Positives = 147/148 (99%)
 Frame = +1

Query: 1    RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 180
            RGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQA
Sbjct: 601  RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 660

Query: 181  AQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIARDF 360
            AQCVGRVIRSKADYGMMIFADKRY+RHDKRSKLPGWILSHLR+AHLNLSTDMA+HIAR+F
Sbjct: 661  AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF 720

Query: 361  LRKMAQPYDKTGGSGKKTLLSQEDLEKM 444
            LRKMAQPYDKTG SGKKTLLSQEDLEKM
Sbjct: 721  LRKMAQPYDKTGSSGKKTLLSQEDLEKM 748


>ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  287 bits (734), Expect = 7e-76
 Identities = 139/155 (89%), Positives = 148/155 (95%)
 Frame = +1

Query: 1    RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALRQA 180
            RGKVAEGIDFDRHYGRLVIMFGVPFQYTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQA
Sbjct: 601  RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA 660

Query: 181  AQCVGRVIRSKADYGMMIFADKRYTRHDKRSKLPGWILSHLREAHLNLSTDMAVHIARDF 360
            AQCVGRVIRSKADYGMMIFADKRY+RHDKRSKLP WILSHL +AHLNLSTDMA+H+ARDF
Sbjct: 661  AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLHDAHLNLSTDMALHVARDF 720

Query: 361  LRKMAQPYDKTGGSGKKTLLSQEDLEKMGNGNNGE 465
            LRKMAQPYDKTGG+G+KTLLSQEDLEKM     G+
Sbjct: 721  LRKMAQPYDKTGGTGRKTLLSQEDLEKMAVSGMGD 755


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