BLASTX nr result

ID: Panax21_contig00029221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029221
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19389.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   226   2e-57
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   219   2e-55
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54

>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  229 bits (584), Expect = 2e-58
 Identities = 111/158 (70%), Positives = 127/158 (80%)
 Frame = -1

Query: 519 DTFALNMIIKAFSMCLEVDEAIRVFREMGLYGCEPNLYTYSYIIKGLCEKGRVDQGLEFY 340
           DTFALNMIIKA+S CLEVDEAIRVFREMGLYGCEPN YTY YI  GLCEKGRV QGL FY
Sbjct: 208 DTFALNMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIANGLCEKGRVSQGLGFY 267

Query: 339 KEMREKELVPKGSSYMILICSLAMEQRFDDATDVVLDMLSNSMPPDLLTYKTXXXXXXXX 160
           +EMR K+LVP  S+Y+ILICSL+ME+RF++AT ++ DML NSM PDLLTYKT        
Sbjct: 268 REMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSRE 327

Query: 159 XXXGHAFDLLEDLRKKDSMMNEKTYKILLNGLHFVSRE 46
                AF+LLEDLRKKD+ M EKTYK L+ GLHF+S+E
Sbjct: 328 GKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE 365


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  229 bits (584), Expect = 2e-58
 Identities = 111/158 (70%), Positives = 127/158 (80%)
 Frame = -1

Query: 519 DTFALNMIIKAFSMCLEVDEAIRVFREMGLYGCEPNLYTYSYIIKGLCEKGRVDQGLEFY 340
           DTFALNMIIKA+S CLEVDEAIRVFREMGLYGCEPN YTY YI  GLCEKGRV QGL FY
Sbjct: 236 DTFALNMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIANGLCEKGRVSQGLGFY 295

Query: 339 KEMREKELVPKGSSYMILICSLAMEQRFDDATDVVLDMLSNSMPPDLLTYKTXXXXXXXX 160
           +EMR K+LVP  S+Y+ILICSL+ME+RF++AT ++ DML NSM PDLLTYKT        
Sbjct: 296 REMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGLSRE 355

Query: 159 XXXGHAFDLLEDLRKKDSMMNEKTYKILLNGLHFVSRE 46
                AF+LLEDLRKKD+ M EKTYK L+ GLHF+S+E
Sbjct: 356 GKCNDAFELLEDLRKKDAWMGEKTYKTLVKGLHFLSQE 393


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  226 bits (575), Expect = 2e-57
 Identities = 108/158 (68%), Positives = 126/158 (79%)
 Frame = -1

Query: 519 DTFALNMIIKAFSMCLEVDEAIRVFREMGLYGCEPNLYTYSYIIKGLCEKGRVDQGLEFY 340
           DTF LNMIIKA+S CLEVDEAIRVFREMGLY C+PN YTY YI KGLCEKGRV+QGLEFY
Sbjct: 236 DTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVEQGLEFY 295

Query: 339 KEMREKELVPKGSSYMILICSLAMEQRFDDATDVVLDMLSNSMPPDLLTYKTXXXXXXXX 160
           KEMR + L+P  S+YMILICSLAME+RF++A ++  DML NSM PDLLTY+T        
Sbjct: 296 KEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLLEGLCRE 355

Query: 159 XXXGHAFDLLEDLRKKDSMMNEKTYKILLNGLHFVSRE 46
                AFDLL++LRK+D +MNEKT+K LLNGLH V R+
Sbjct: 356 GRDSEAFDLLDELRKRDKLMNEKTFKTLLNGLHTVGRD 393


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  219 bits (557), Expect = 2e-55
 Identities = 106/158 (67%), Positives = 124/158 (78%)
 Frame = -1

Query: 519 DTFALNMIIKAFSMCLEVDEAIRVFREMGLYGCEPNLYTYSYIIKGLCEKGRVDQGLEFY 340
           DTFALNMIIKAF+ C EVDEAIRVFREMGLYGCEPN Y+Y YI+KGLCEKGRV QGL FY
Sbjct: 225 DTFALNMIIKAFAKCREVDEAIRVFREMGLYGCEPNGYSYGYIVKGLCEKGRVGQGLGFY 284

Query: 339 KEMREKELVPKGSSYMILICSLAMEQRFDDATDVVLDMLSNSMPPDLLTYKTXXXXXXXX 160
           KEM+ KEL+P G +YMILICSLA++ R  +A DVV DML+NSM PD LTY+T        
Sbjct: 285 KEMKRKELIPSGGTYMILICSLAVDLRLGEAIDVVFDMLANSMSPDFLTYRTVLEGLCRE 344

Query: 159 XXXGHAFDLLEDLRKKDSMMNEKTYKILLNGLHFVSRE 46
                AF+LLE+ RK+D  M++KTYKILLN L FV+R+
Sbjct: 345 GKTDEAFELLEEFRKRDMSMSQKTYKILLNALQFVNRD 382


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  216 bits (549), Expect = 2e-54
 Identities = 106/157 (67%), Positives = 121/157 (77%)
 Frame = -1

Query: 519 DTFALNMIIKAFSMCLEVDEAIRVFREMGLYGCEPNLYTYSYIIKGLCEKGRVDQGLEFY 340
           DTF LNMIIKA++ CLEVDEA+RVFREMGLYGCE N Y+YSY++KGLC KGR  QGL FY
Sbjct: 169 DTFVLNMIIKAYAKCLEVDEAVRVFREMGLYGCEANAYSYSYLVKGLCGKGRSGQGLGFY 228

Query: 339 KEMREKELVPKGSSYMILICSLAMEQRFDDATDVVLDMLSNSMPPDLLTYKTXXXXXXXX 160
           KEM+ K LVP GS+YMILICSL ME+RF++A  VV DML +SM PDLLTY+T        
Sbjct: 229 KEMKGKGLVPSGSTYMILICSLGMERRFEEAIGVVFDMLGDSMSPDLLTYRTVLEGLCRE 288

Query: 159 XXXGHAFDLLEDLRKKDSMMNEKTYKILLNGLHFVSR 49
                AF+LLE+ RKKD  M EK YK LLNGLHFVSR
Sbjct: 289 GMVDKAFELLEEWRKKDGFMGEKNYKSLLNGLHFVSR 325


Top