BLASTX nr result

ID: Panax21_contig00029218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029218
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635381.1| PREDICTED: stress-associated endoplasmic ret...    64   2e-08
ref|XP_002307905.1| predicted protein [Populus trichocarpa] gi|1...    62   4e-08
gb|AFW74647.1| membrane protein [Zea mays]                             62   5e-08
ref|XP_002451175.1| hypothetical protein SORBIDRAFT_05g025380 [S...    62   5e-08
gb|ABR16729.1| unknown [Picea sitchensis]                              62   5e-08

>ref|XP_003635381.1| PREDICTED: stress-associated endoplasmic reticulum protein 2-like
           isoform 1 [Vitis vinifera]
           gi|359496952|ref|XP_003635382.1| PREDICTED:
           stress-associated endoplasmic reticulum protein 2-like
           isoform 2 [Vitis vinifera]
          Length = 68

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = -2

Query: 394 MTTSKRLAERKNAKFEKNISRRGSGAENSLRK--KLTVENILLVFFALLIVGSFVFQIIK 221
           MTTSKRLA+RK AKF+KNI++RGS  E S +K     V  ILL FF  ++VGS +FQII+
Sbjct: 1   MTTSKRLADRKVAKFQKNITKRGSVPETSTKKGYDYPVGPILLGFFVFVVVGSSLFQIIR 60

Query: 220 LA 215
            A
Sbjct: 61  TA 62


>ref|XP_002307905.1| predicted protein [Populus trichocarpa] gi|118489449|gb|ABK96527.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222853881|gb|EEE91428.1| predicted protein [Populus
           trichocarpa]
          Length = 68

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = -2

Query: 394 MTTSKRLAERKNAKFEKNISRRGSGAENSLRK--KLTVENILLVFFALLIVGSFVFQIIK 221
           MTTSKRL+ERK AKF KNI++RGS  E S +K     V  ILL FF  +++GS +FQII+
Sbjct: 1   MTTSKRLSERKVAKFHKNITKRGSVPETSTKKGYDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 220 LA 215
            A
Sbjct: 61  TA 62


>gb|AFW74647.1| membrane protein [Zea mays]
          Length = 68

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/62 (51%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
 Frame = -2

Query: 394 MTTSKRLAERKNAKFEKNISRRGSGAENSLRKK--LTVENILLVFFALLIVGSFVFQIIK 221
           MTTS+RLA+RK+AKF+KNI++RGS  E +++K     V  I+L FF  +++GS +FQII+
Sbjct: 1   MTTSRRLADRKSAKFQKNITKRGSVPETTVKKSNDYPVGPIVLGFFIFVVIGSSLFQIIR 60

Query: 220 LA 215
            A
Sbjct: 61  TA 62


>ref|XP_002451175.1| hypothetical protein SORBIDRAFT_05g025380 [Sorghum bicolor]
           gi|241937018|gb|EES10163.1| hypothetical protein
           SORBIDRAFT_05g025380 [Sorghum bicolor]
          Length = 68

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
 Frame = -2

Query: 394 MTTSKRLAERKNAKFEKNISRRGSGAENSLRK--KLTVENILLVFFALLIVGSFVFQIIK 221
           MTTS+RLA+RK AKF+KNI+RRGS  E +++K     V  ++L FF  +++GS +FQII+
Sbjct: 1   MTTSRRLADRKTAKFQKNITRRGSVPETTVKKGNDYPVGPVVLGFFIFVVIGSSLFQIIR 60

Query: 220 LA 215
            A
Sbjct: 61  TA 62


>gb|ABR16729.1| unknown [Picea sitchensis]
          Length = 68

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
 Frame = -2

Query: 394 MTTSKRLAERKNAKFEKNISRRGSGAENSLRKKLT--VENILLVFFALLIVGSFVFQIIK 221
           MTTS+RLA+RK+AKF+KNI +RG   E +++K  T  V  I+L FF  +++GS +FQII+
Sbjct: 1   MTTSRRLADRKSAKFQKNILKRGGVPETTIKKGNTYPVGPIVLGFFVFIVIGSSIFQIIR 60

Query: 220 LA 215
            A
Sbjct: 61  TA 62


Top