BLASTX nr result

ID: Panax21_contig00029208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029208
         (754 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG49895.1| PnFL-1 [Ipomoea nil]                                   209   7e-52
ref|XP_002268694.1| PREDICTED: presqualene diphosphate phosphata...   196   4e-48
emb|CAN64505.1| hypothetical protein VITISV_016998 [Vitis vinifera]   194   2e-47
ref|NP_001169593.1| uncharacterized protein LOC100383474 [Zea ma...   148   1e-33
ref|XP_003525807.1| PREDICTED: presqualene diphosphate phosphata...   146   4e-33

>gb|AAG49895.1| PnFL-1 [Ipomoea nil]
          Length = 209

 Score =  209 bits (531), Expect = 7e-52
 Identities = 112/223 (50%), Positives = 140/223 (62%), Gaps = 7/223 (3%)
 Frame = +2

Query: 17  MDSKPPPS-------ILRRLIEFDIALSLHLHNFTQRILPRSVLKSLEISGDGRLFFPIA 175
           M+SKPPP        +LRRLI+FD  LSL L+  T  ILP SVLK+LEISGDGRLFFP+ 
Sbjct: 1   MESKPPPPSPPPSPPLLRRLIDFDTQLSLRLYTLTHPILPYSVLKTLEISGDGRLFFPVI 60

Query: 176 ISLFLSPLISPNFSILFLRSFLADLIIGSVFDLLLVGLIKHLVRRPRPVYNKHMSMVFAV 355
           IS+ L+   +         +FL DL++G+V DL ++G++KHL++RPRPVYNK+M + FAV
Sbjct: 61  ISILLATSAAA--------AFLVDLLLGAVLDLAVIGILKHLIQRPRPVYNKNMFLSFAV 112

Query: 356 DHWSFPSGHSSRVCFIAAFFXXXXXXXXXXXXXXXXXGTELLXXXXXXXXXXXXCSWAIA 535
           DHWSFPSGHSSRV FIA  F                   +L              +WA  
Sbjct: 113 DHWSFPSGHSSRVFFIATMFYLSFDLVQGFL-------LDLRYDLFADHFVYIIGAWATI 165

Query: 536 TSASRVFLGRHYVFDVIAGACLGIFEALFVFYYLNYSKLSSIF 664
           TS SR+ LGRH+V DV+AGACLG+ E LF F + NY KLSS F
Sbjct: 166 TSVSRILLGRHFVLDVVAGACLGVLEGLFSFRFFNYDKLSSFF 208


>ref|XP_002268694.1| PREDICTED: presqualene diphosphate phosphatase [Vitis vinifera]
          Length = 214

 Score =  196 bits (498), Expect = 4e-48
 Identities = 106/208 (50%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
 Frame = +2

Query: 29  PPPSILRRLIEFDIALSLHLHNFTQRILPRSVLKSLEISGDGRLFFPIAISLFLSPLISP 208
           P P++LRRLI  D  LSLHLH   Q + PRS+LK+LE++GDGR FFP+A+SL  S  + P
Sbjct: 17  PSPTLLRRLINLDTTLSLHLHTLFQPV-PRSLLKTLELAGDGRFFFPVAVSLLSSSSLRP 75

Query: 209 NFSILFLRSFLADLIIGSVFDLLLVGLIKHLVRRPRPVYNKHMSMVFAVDHWSFPSGHSS 388
                     L  L+IG + DLLLVG+IK++VRRPRPVYNK M +  AVDHWSFPSGHSS
Sbjct: 76  ---------ILIPLLIGLLLDLLLVGVIKYIVRRPRPVYNKGMHLTVAVDHWSFPSGHSS 126

Query: 389 RVCFIAAFFXXXXXXXXXXXXXXXXXGTEL---LXXXXXXXXXXXXCSWAIATSASRVFL 559
           RV F AAF                   +                  C W+ ATS SRV L
Sbjct: 127 RVVFAAAFLYLSTALIGEAVAQLRSTESRFGSDDSGKAVDFIVLIVCLWSAATSISRVLL 186

Query: 560 GRHYVFDVIAGACLGIFEALFVFYYLNY 643
           GRH+VFDV+AGACLG+ EALFVF++L Y
Sbjct: 187 GRHFVFDVVAGACLGVLEALFVFHFLRY 214


>emb|CAN64505.1| hypothetical protein VITISV_016998 [Vitis vinifera]
          Length = 288

 Score =  194 bits (493), Expect = 2e-47
 Identities = 105/208 (50%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
 Frame = +2

Query: 29  PPPSILRRLIEFDIALSLHLHNFTQRILPRSVLKSLEISGDGRLFFPIAISLFLSPLISP 208
           P P++LRRLI  D  LSLHLH   Q + PRS+LK+LE++GDGR FFP+A+SL  S  + P
Sbjct: 91  PSPTLLRRLINLDTTLSLHLHTLFQPV-PRSLLKTLELAGDGRFFFPVAVSLLSSSSLRP 149

Query: 209 NFSILFLRSFLADLIIGSVFDLLLVGLIKHLVRRPRPVYNKHMSMVFAVDHWSFPSGHSS 388
                     L  L+IG + DLLLVG+IK++VRRPRP YNK M +  AVDHWSFPSGHSS
Sbjct: 150 ---------ILIPLLIGLLLDLLLVGVIKYIVRRPRPXYNKGMHLTVAVDHWSFPSGHSS 200

Query: 389 RVCFIAAFFXXXXXXXXXXXXXXXXXGTEL---LXXXXXXXXXXXXCSWAIATSASRVFL 559
           RV F AAF                   +                  C W+ ATS SRV L
Sbjct: 201 RVVFAAAFLYLSTALIGEAVAQLRSTESRFGSDDSGKAVDFIVLIVCLWSAATSISRVLL 260

Query: 560 GRHYVFDVIAGACLGIFEALFVFYYLNY 643
           GRH+VFDV+AGACLG+ EALFVF++L Y
Sbjct: 261 GRHFVFDVVAGACLGVLEALFVFHFLRY 288


>ref|NP_001169593.1| uncharacterized protein LOC100383474 [Zea mays]
           gi|224030267|gb|ACN34209.1| unknown [Zea mays]
           gi|413923360|gb|AFW63292.1| hypothetical protein
           ZEAMMB73_037308 [Zea mays]
          Length = 204

 Score =  148 bits (373), Expect = 1e-33
 Identities = 91/211 (43%), Positives = 113/211 (53%), Gaps = 1/211 (0%)
 Frame = +2

Query: 35  PSILRRLIEFDIALSLHLHNFTQRILPRSVLKSLEISGDGRLFFPIAISLFLSPLISPNF 214
           P++L  +  FD A+SL LH     + PR +LK+LE++GDGR++ P+ ISL L      N 
Sbjct: 16  PTLLGGVRGFDAAVSLRLHALFLPV-PRLLLKALEVAGDGRIWLPVPISLLLLSASPANA 74

Query: 215 SILFLRSFLADLIIGSVFDLLLVGLIKHLVRRPRPVYN-KHMSMVFAVDHWSFPSGHSSR 391
           S       LA L+ G V DL+LVGL+K  VRRPRP YN K M +  + DHWSFPSGHSSR
Sbjct: 75  SGA-ASPLLAGLVAGLVLDLILVGLVKVFVRRPRPAYNAKDMYVAVSADHWSFPSGHSSR 133

Query: 392 VCFIAAFFXXXXXXXXXXXXXXXXXGTELLXXXXXXXXXXXXCSWAIATSASRVFLGRHY 571
              +A+F                                     WA ATSASRV LGRHY
Sbjct: 134 AFLVASFLAAGGFRPREALFL-----------------------WAAATSASRVLLGRHY 170

Query: 572 VFDVIAGACLGIFEALFVFYYLNYSKLSSIF 664
           V DV+AGACLG+FEA      L +    S F
Sbjct: 171 VLDVVAGACLGVFEAWLSILLLGFMCAQSTF 201


>ref|XP_003525807.1| PREDICTED: presqualene diphosphate phosphatase-like [Glycine max]
          Length = 224

 Score =  146 bits (369), Expect = 4e-33
 Identities = 90/227 (39%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
 Frame = +2

Query: 5   HFPIMDSKPPPSILRRLIEFDIALSLHLHNFTQRILPRSVLKSLEISGDGRLFFPIAISL 184
           H P       P +LRR+   D A+SL++H  T+ I PR +L+ LE+  D R FFP+++SL
Sbjct: 5   HEPPKSPAAAPPLLRRIHNLDNAISLYIHTLTRPIAPRPLLRFLELLADFRFFFPVSLSL 64

Query: 185 FL-SPLISPNFSILFLRSFLADLIIGSVFDLLLVGLIKHLVRRPRPVYNKH--MSMVFAV 355
           +L +P  SP       R+ L  L++ S+ DLL + L+K LVRR RP Y+ H   S V +V
Sbjct: 65  YLAAPSSSP-----LRRNLLLPLLLCSLLDLLFIALLKFLVRRSRPSYSNHSQYSAVVSV 119

Query: 356 DHWSFPSGHSSRVCFIAAFF--------XXXXXXXXXXXXXXXXXGTELLXXXXXXXXXX 511
           D++SFPSGHSSRVCF+A+ F                         G + L          
Sbjct: 120 DNFSFPSGHSSRVCFVASVFSLSRSSLLADLSRPRVAILVRRWFAGDDALAVDMLLAAIW 179

Query: 512 XXCSWAIATSASRVFLGRHYVFDVIAGACLGIFEALFVFYYLNYSKL 652
              +WA+ T  SRV LGRHYV DV  GAC G+ EA+  F  L Y  L
Sbjct: 180 ---AWAVITVVSRVALGRHYVIDVFFGACFGVLEAMVTFRVLEYRGL 223


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