BLASTX nr result

ID: Panax21_contig00029187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029187
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264907.2| PREDICTED: histidinol dehydrogenase, chlorop...    54   3e-15
emb|CBI35507.3| unnamed protein product [Vitis vinifera]               54   1e-13

>ref|XP_002264907.2| PREDICTED: histidinol dehydrogenase, chloroplastic-like [Vitis
           vinifera]
          Length = 562

 Score = 54.3 bits (129), Expect(2) = 3e-15
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 116 CYFPTVSPHNVIGCSMKSYKLSDLTQVEVNNLKARPRI 3
           CY    S H  I CSMKSY+LS+L+Q EVN+LKARPRI
Sbjct: 110 CYLREGSTHRSISCSMKSYRLSELSQAEVNSLKARPRI 147



 Score = 52.0 bits (123), Expect(2) = 3e-15
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = -3

Query: 370 VPLRTTLLSSSVVPHNCLDLLQVVMECQLLSFNWSKCLSKSFQSCDFQIIGSRTNKYRGF 191
           + + ++++ SS      + LL+VVM+ QL+SFN S  L+K +QS  F++IG+  N YRG 
Sbjct: 50  ISIPSSIIHSSNAAFWSISLLKVVMDIQLVSFNRSNFLTKLWQSHQFRVIGTPQNIYRGS 109

Query: 190 CY 185
           CY
Sbjct: 110 CY 111


>emb|CBI35507.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score = 54.3 bits (129), Expect(2) = 1e-13
 Identities = 25/38 (65%), Positives = 29/38 (76%)
 Frame = -2

Query: 116 CYFPTVSPHNVIGCSMKSYKLSDLTQVEVNNLKARPRI 3
           CY    S H  I CSMKSY+LS+L+Q EVN+LKARPRI
Sbjct: 94  CYLREGSTHRSISCSMKSYRLSELSQAEVNSLKARPRI 131



 Score = 46.6 bits (109), Expect(2) = 1e-13
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = -3

Query: 310 LQVVMECQLLSFNWSKCLSKSFQSCDFQIIGSRTNKYRGFCY 185
           L VVM+ QL+SFN S  L+K +QS  F++IG+  N YRG CY
Sbjct: 54  LLVVMDIQLVSFNRSNFLTKLWQSHQFRVIGTPQNIYRGSCY 95


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