BLASTX nr result

ID: Panax21_contig00029186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029186
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   185   3e-45
ref|XP_004138647.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   185   3e-45
emb|CBI18269.3| unnamed protein product [Vitis vinifera]              184   9e-45
ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   184   9e-45
ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   183   1e-44

>ref|XP_004171019.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis
           sativus]
          Length = 463

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/110 (80%), Positives = 101/110 (91%)
 Frame = +1

Query: 4   SKSPFVLIIRGGCSFEDKVRRAQTAGFKAAIVYDNEDGDLVAMAGNSAGIKIHAVFVSKA 183
           + SPF LI+RGGCSFEDKVRRAQ AGFKAAI+YDNEDG L+AMAG+SAGI+IHAVFV+K 
Sbjct: 88  TSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNEDGGLIAMAGSSAGIRIHAVFVTKT 147

Query: 184 SGQVLVKYADVRDVELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 333
           SG+ L KYA + +VE+WI+PSFENSAWSIMAISFISLLAMSAVLATCFFV
Sbjct: 148 SGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLAMSAVLATCFFV 197


>ref|XP_004138647.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Cucumis
           sativus]
          Length = 451

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/110 (80%), Positives = 101/110 (91%)
 Frame = +1

Query: 4   SKSPFVLIIRGGCSFEDKVRRAQTAGFKAAIVYDNEDGDLVAMAGNSAGIKIHAVFVSKA 183
           + SPF LI+RGGCSFEDKVRRAQ AGFKAAI+YDNEDG L+AMAG+SAGI+IHAVFV+K 
Sbjct: 76  TSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNEDGGLIAMAGSSAGIRIHAVFVTKT 135

Query: 184 SGQVLVKYADVRDVELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 333
           SG+ L KYA + +VE+WI+PSFENSAWSIMAISFISLLAMSAVLATCFFV
Sbjct: 136 SGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLAMSAVLATCFFV 185


>emb|CBI18269.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  184 bits (466), Expect = 9e-45
 Identities = 96/112 (85%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   GSKSPFVLIIRGGCSFEDKVRRAQTAGFKAAIVYDNEDGD-LVAMAGNSAGIKIHAVFVS 177
           G+ SPFVLI+RGGC FEDKVR AQ AGF AAIVYDNEDG  LVAMAGNSAGIKIHAVFVS
Sbjct: 61  GASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVFVS 120

Query: 178 KASGQVLVKYADVRDVELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 333
           KASG VL  YA   D+ELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV
Sbjct: 121 KASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 172


>ref|XP_002269731.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Vitis vinifera]
          Length = 446

 Score =  184 bits (466), Expect = 9e-45
 Identities = 96/112 (85%), Positives = 99/112 (88%), Gaps = 1/112 (0%)
 Frame = +1

Query: 1   GSKSPFVLIIRGGCSFEDKVRRAQTAGFKAAIVYDNEDGD-LVAMAGNSAGIKIHAVFVS 177
           G+ SPFVLI+RGGC FEDKVR AQ AGF AAIVYDNEDG  LVAMAGNSAGIKIHAVFVS
Sbjct: 77  GASSPFVLIVRGGCGFEDKVRNAQKAGFAAAIVYDNEDGGVLVAMAGNSAGIKIHAVFVS 136

Query: 178 KASGQVLVKYADVRDVELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 333
           KASG VL  YA   D+ELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV
Sbjct: 137 KASGMVLQTYAGSPDMELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 188


>ref|XP_003536389.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Glycine max]
          Length = 469

 Score =  183 bits (464), Expect = 1e-44
 Identities = 91/111 (81%), Positives = 102/111 (91%), Gaps = 1/111 (0%)
 Frame = +1

Query: 4   SKSPFVLIIRGGCSFEDKVRRAQTAGFKAAIVYDNEDGD-LVAMAGNSAGIKIHAVFVSK 180
           + SPF L++RGGCSFE+KVRRAQ AGFKA IVYDNEDG  LVAMAGNSAGIKIHAVFVSK
Sbjct: 76  ASSPFALVVRGGCSFEEKVRRAQKAGFKAVIVYDNEDGGILVAMAGNSAGIKIHAVFVSK 135

Query: 181 ASGQVLVKYADVRDVELWIIPSFENSAWSIMAISFISLLAMSAVLATCFFV 333
           ASG++L KYA + +VE+W+IP+FENSAWSIMAISFISLLAMSAVLATCFFV
Sbjct: 136 ASGEILSKYAGLTNVEIWLIPTFENSAWSIMAISFISLLAMSAVLATCFFV 186


Top