BLASTX nr result

ID: Panax21_contig00029169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029169
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [R...   206   1e-51
ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   199   2e-49
ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|2...   190   9e-47
ref|XP_004138946.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1...   187   1e-45
ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arab...   187   1e-45

>ref|XP_002533349.1| poly(ADP-ribose) glycohydrolase, putative [Ricinus communis]
           gi|223526814|gb|EEF29034.1| poly(ADP-ribose)
           glycohydrolase, putative [Ricinus communis]
          Length = 553

 Score =  206 bits (525), Expect = 1e-51
 Identities = 108/163 (66%), Positives = 130/163 (79%), Gaps = 6/163 (3%)
 Frame = -3

Query: 473 NRKDLKSILRYVPVVLRSSALFWPPQVVEALKALSGGPNLSHVISGELLFLAISDIRNSL 294
           +R+DLKS++ ++P+V+RSSAL WP QVVE LK LS GP+ S+V SGELLF AISD+RNSL
Sbjct: 3   SREDLKSVIPFLPLVIRSSALSWPSQVVETLKELSRGPDFSNVNSGELLFYAISDLRNSL 62

Query: 293 NLSSERLASSAGEGYALFFDDLLSRAEAAKWFGEVVPELANLVLRLPFLLEAHYQNAE-- 120
           +LS+  LA SA +GYALFFD+L+SRAE+ KWF EV+P LANL LRLP LLE HYQ A+  
Sbjct: 63  SLSTHSLAPSAQQGYALFFDELISRAESKKWFQEVLPALANLALRLPSLLELHYQTADSL 122

Query: 119 ----ETGLRLLESQEPGIVVLSQELIGALLACSLLCLFPITIR 3
               +TGLRLL  QE GIV LSQELIGALLAC+  CLFP+T R
Sbjct: 123 LDGVKTGLRLLGPQEAGIVYLSQELIGALLACAFFCLFPVTGR 165


>ref|XP_002280371.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1 [Vitis vinifera]
           gi|296084375|emb|CBI24763.3| unnamed protein product
           [Vitis vinifera]
          Length = 562

 Score =  199 bits (506), Expect = 2e-49
 Identities = 103/162 (63%), Positives = 129/162 (79%), Gaps = 6/162 (3%)
 Frame = -3

Query: 470 RKDLKSILRYVPVVLRSSALFWPPQVVEALKALSGGPNLSHVISGELLFLAISDIRNSLN 291
           R+DL+SIL Y+ VV+  S++ WP  V+E LKA+S GP+ S + SGELLFLAISD+R+SL+
Sbjct: 4   REDLRSILPYLGVVVEGSSVLWPSPVIEPLKAISRGPDHSGIHSGELLFLAISDLRHSLS 63

Query: 290 LSSERLASSAGEGYALFFDDLLSRAEAAKWFGEVVPELANLVLRLPFLLEAHYQNAE--- 120
           LSS+RL++SA  GYALFFD LLSR E++KWF EV+P LANL+LR P LLE HY+NA+   
Sbjct: 64  LSSQRLSASAPHGYALFFDKLLSRPESSKWFAEVLPALANLLLRFPSLLEFHYRNADTLI 123

Query: 119 ---ETGLRLLESQEPGIVVLSQELIGALLACSLLCLFPITIR 3
              +TGLR+L+SQ+ GIV LSQELIGALL CS  CLFPIT R
Sbjct: 124 DGVQTGLRILDSQQSGIVFLSQELIGALLTCSFFCLFPITNR 165


>ref|XP_002309711.1| predicted protein [Populus trichocarpa] gi|222852614|gb|EEE90161.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  190 bits (483), Expect = 9e-47
 Identities = 103/164 (62%), Positives = 125/164 (76%), Gaps = 7/164 (4%)
 Frame = -3

Query: 473 NRKDLKSILRYVPVVLRSSALFWPPQVVEALKALSGGPNLSHVISGELLFLAISDIRNSL 294
           NR+DLKS+L ++P++LRSS LFWP QVVE LK LS GP  S V +GELLF AIS+IR+SL
Sbjct: 3   NREDLKSMLPFLPLLLRSSNLFWPSQVVELLKTLSKGPFYSKVDTGELLFNAISNIRDSL 62

Query: 293 NLSS-ERLASSAGEGYALFFDDLLSRAEAAKWFGEVVPELANLVLRLPFLLEAHYQNAE- 120
            L S  RL+  A EGYALFFD+L+SR EAAKWF +VVP LA L+LRLP LLE+HYQNA+ 
Sbjct: 63  ALPSLHRLSPFAHEGYALFFDELISREEAAKWFADVVPTLAKLLLRLPSLLESHYQNADN 122

Query: 119 -----ETGLRLLESQEPGIVVLSQELIGALLACSLLCLFPITIR 3
                +TG RLL  QE G+V L QELIG+LL C+  CLFP++ R
Sbjct: 123 LRNGVKTGFRLLGPQEAGVVFLGQELIGSLLVCAFFCLFPVSDR 166


>ref|XP_004138946.1| PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Cucumis sativus]
           gi|449505627|ref|XP_004162526.1| PREDICTED:
           poly(ADP-ribose) glycohydrolase 1-like [Cucumis sativus]
          Length = 550

 Score =  187 bits (474), Expect = 1e-45
 Identities = 97/167 (58%), Positives = 123/167 (73%), Gaps = 10/167 (5%)
 Frame = -3

Query: 473 NRKDLKSILRYVPVVLRSSALFWPPQVVEALKALSGGPNLSHVISGELLFLAISDIRNSL 294
           +R+DL SIL ++P++LRSS LFWP QVVE LK+++ GP+ S V SGE LF +IS+IRNSL
Sbjct: 9   SREDLNSILPFLPLLLRSSTLFWPSQVVETLKSMAAGPDHSGVNSGEALFRSISNIRNSL 68

Query: 293 NLSSERLASSAGEGYALFFDDLLSRAEAAKWFGEVVPELANLVLRLPFLLEAHYQNAEE- 117
           +LS+ RLASS+  GYALFFD L+S  E+ +WF EV+P L NL+L+ P LLE HY+N ++ 
Sbjct: 69  SLSNHRLASSSQRGYALFFDKLMSETESMQWFREVIPALGNLLLQFPSLLETHYRNTDQL 128

Query: 116 ---------TGLRLLESQEPGIVVLSQELIGALLACSLLCLFPITIR 3
                    TGLRLL SQ  G V LSQELIGALLAC+  CLFP+  R
Sbjct: 129 ASKGSGKAKTGLRLLASQVAGTVYLSQELIGALLACAFFCLFPVNDR 175


>ref|XP_002881202.1| hypothetical protein ARALYDRAFT_482111 [Arabidopsis lyrata subsp.
           lyrata] gi|297327041|gb|EFH57461.1| hypothetical protein
           ARALYDRAFT_482111 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score =  187 bits (474), Expect = 1e-45
 Identities = 96/159 (60%), Positives = 123/159 (77%), Gaps = 6/159 (3%)
 Frame = -3

Query: 473 NRKDLKSILRYVPVVLRSSALFWPPQVVEALKALSGGPNLSHVISGELLFLAISDIRNSL 294
           NR+DL SIL Y+P+V+RSS+L+WPP+VVEALKA+S GP+ S V SGE+L+ AISD+R SL
Sbjct: 3   NREDLNSILSYLPLVIRSSSLYWPPRVVEALKAMSEGPSHSRVDSGEVLWQAISDMRRSL 62

Query: 293 NLSSERLASSAGEGYALFFDDLLSRAEAAKWFGEVVPELANLVLRLPFLLEAHYQNAE-- 120
           + S+  L  SA  GYAL FD+L+   E+ +WF E++P LA L+L+ P LLE H+QNA+  
Sbjct: 63  SFST--LEPSASHGYALLFDELIDEKESKRWFDEIIPALARLLLQFPSLLEVHFQNADNF 120

Query: 119 ----ETGLRLLESQEPGIVVLSQELIGALLACSLLCLFP 15
               +TGLRLL+SQ+ GIV LSQELIGALLACS  CLFP
Sbjct: 121 VSGIKTGLRLLDSQQAGIVFLSQELIGALLACSFFCLFP 159


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