BLASTX nr result

ID: Panax21_contig00029163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029163
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525301.1| amino acid binding protein, putative [Ricinu...   199   4e-49
ref|XP_002310330.1| predicted protein [Populus trichocarpa] gi|2...   199   4e-49
ref|XP_002320665.1| predicted protein [Populus trichocarpa] gi|2...   191   9e-47
ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854...   188   6e-46
emb|CBI35746.3| unnamed protein product [Vitis vinifera]              188   6e-46

>ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
           gi|223535459|gb|EEF37129.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 477

 Score =  199 bits (505), Expect = 4e-49
 Identities = 103/173 (59%), Positives = 125/173 (72%)
 Frame = -2

Query: 608 SQGSIVIQEYYIRQKDGCTLNTENERFILTKCLTAAVERRVSHGLRLDVNTQNRLGLLSD 429
           S+G++  QEY+IR KDGCTL+TE+ER  LTKCL AA ERR SHGLRLD++T NR+GLLSD
Sbjct: 308 SKGTMARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRASHGLRLDISTHNRVGLLSD 367

Query: 428 VTRVFRENGLSIVRAELGTRGERAIGSFYVTDTWGYNVNSDTVEAVRKEIGGSILVVNEX 249
           VTRVFRENGLSI RAE+G +G+RA+GSFY+TD  G   N+ T+E VRKEIGGS+LVVN+ 
Sbjct: 368 VTRVFRENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVVNKS 427

Query: 248 XXXXXXXXXXXXXXXXXXXXXXSDVEERPRFSIGCLLWSQLERLSSNFRPIKS 90
                                    EE+P+FS+G LLWSQLERLS NF  I+S
Sbjct: 428 PGWTPRTPSTAGISRTSSGSVG---EEKPKFSLGSLLWSQLERLSGNFGSIRS 477


>ref|XP_002310330.1| predicted protein [Populus trichocarpa] gi|222853233|gb|EEE90780.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  199 bits (505), Expect = 4e-49
 Identities = 101/174 (58%), Positives = 126/174 (72%), Gaps = 1/174 (0%)
 Frame = -2

Query: 608 SQGSIVIQEYYIRQKDGCTLNTENERFILTKCLTAAVERRVSHGLRLDVNTQNRLGLLSD 429
           S+G++  QEY+IRQKDGCTL+T++ER  LT+CL AA+ERRVSHGLRLD+ T NR+GLLSD
Sbjct: 309 SKGTMADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVSHGLRLDIRTHNRMGLLSD 368

Query: 428 VTRVFRENGLSIVRAELGTRGERAIGSFYVTDTWGYNVNSDTVEAVRKEIGGSILVVNEX 249
           +TR FRENGLSI  AE+GT G+RA+GSFYVTD  GY  N   +E V+KEIGGSI+VVN+ 
Sbjct: 369 LTRAFRENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGGSIVVVNKS 428

Query: 248 XXXXXXXXXXXXXXXXXXXXXXSDV-EERPRFSIGCLLWSQLERLSSNFRPIKS 90
                                 S + E++PRFS+G L WSQLERLS+NF  I+S
Sbjct: 429 PGWTPKTSKTPSVASISRTSSGSSIHEDKPRFSLGSLFWSQLERLSNNFSSIRS 482


>ref|XP_002320665.1| predicted protein [Populus trichocarpa] gi|222861438|gb|EEE98980.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  191 bits (485), Expect = 9e-47
 Identities = 97/173 (56%), Positives = 123/173 (71%)
 Frame = -2

Query: 608 SQGSIVIQEYYIRQKDGCTLNTENERFILTKCLTAAVERRVSHGLRLDVNTQNRLGLLSD 429
           ++G++  QEY+IRQ+DGCTL+TE+ER  LT+CL AA+ERRVSHG RLD+ T NR+GLLS+
Sbjct: 310 AKGTMADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVSHGARLDICTHNRMGLLSN 369

Query: 428 VTRVFRENGLSIVRAELGTRGERAIGSFYVTDTWGYNVNSDTVEAVRKEIGGSILVVNEX 249
           VTR FRENGLSI RAE+GT G+RA+GSFYVTD  GY  N   ++ V+KE+GGS++VVN+ 
Sbjct: 370 VTRAFRENGLSISRAEIGTNGDRAVGSFYVTDASGYEANPQAIDEVKKEMGGSVVVVNKS 429

Query: 248 XXXXXXXXXXXXXXXXXXXXXXSDVEERPRFSIGCLLWSQLERLSSNFRPIKS 90
                                 S  EE+PR S G L WSQL+RLSSNF  I+S
Sbjct: 430 PGWTPKTSRTPSVGSVSRNSSGSIDEEKPRLSPGSLFWSQLKRLSSNFSSIRS 482


>ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
           vinifera]
          Length = 338

 Score =  188 bits (478), Expect = 6e-46
 Identities = 101/171 (59%), Positives = 122/171 (71%)
 Frame = -2

Query: 608 SQGSIVIQEYYIRQKDGCTLNTENERFILTKCLTAAVERRVSHGLRLDVNTQNRLGLLSD 429
           S+GSI +QEY+IRQ DGCTL TE+ER  + +CL AA+ERRV+HGLRLD+  +NRLGLLSD
Sbjct: 172 SKGSIAVQEYFIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSD 231

Query: 428 VTRVFRENGLSIVRAELGTRGERAIGSFYVTDTWGYNVNSDTVEAVRKEIGGSILVVNEX 249
           +TRVFRENGLSI  AE+G  GERA GSFYVTD  G +V+ +TVE +RKEIGG+I+ VN+ 
Sbjct: 232 ITRVFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNK- 290

Query: 248 XXXXXXXXXXXXXXXXXXXXXXSDVEERPRFSIGCLLWSQLERLSSNFRPI 96
                                 S VE RPRFS+G  LWSQ+ER SSNF PI
Sbjct: 291 ----SSVPPSLPASPSRDRSTASSVENRPRFSLG-TLWSQIERFSSNFGPI 336


>emb|CBI35746.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  188 bits (478), Expect = 6e-46
 Identities = 101/171 (59%), Positives = 122/171 (71%)
 Frame = -2

Query: 608 SQGSIVIQEYYIRQKDGCTLNTENERFILTKCLTAAVERRVSHGLRLDVNTQNRLGLLSD 429
           S+GSI +QEY+IRQ DGCTL TE+ER  + +CL AA+ERRV+HGLRLD+  +NRLGLLSD
Sbjct: 158 SKGSIAVQEYFIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSD 217

Query: 428 VTRVFRENGLSIVRAELGTRGERAIGSFYVTDTWGYNVNSDTVEAVRKEIGGSILVVNEX 249
           +TRVFRENGLSI  AE+G  GERA GSFYVTD  G +V+ +TVE +RKEIGG+I+ VN+ 
Sbjct: 218 ITRVFRENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNK- 276

Query: 248 XXXXXXXXXXXXXXXXXXXXXXSDVEERPRFSIGCLLWSQLERLSSNFRPI 96
                                 S VE RPRFS+G  LWSQ+ER SSNF PI
Sbjct: 277 ----SSVPPSLPASPSRDRSTASSVENRPRFSLG-TLWSQIERFSSNFGPI 322


Top