BLASTX nr result

ID: Panax21_contig00029159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029159
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263...   158   9e-37
ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]...   156   3e-36
gb|AAP23938.1| one helix protein [Ipomoea nil]                        150   3e-34
ref|XP_002531553.1| OHP, putative [Ricinus communis] gi|22352881...   146   3e-33
gb|AFK33575.1| unknown [Lotus japonicus]                              138   8e-31

>ref|XP_002270357.1| PREDICTED: uncharacterized protein LOC100263187 [Vitis vinifera]
           gi|297740337|emb|CBI30519.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  158 bits (399), Expect = 9e-37
 Identities = 83/121 (68%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = +3

Query: 15  MATQSALSS-SFLQTALPLHHR-TKQISPFHNLNQINKTSRNKKPVSFRVQAAKLPAGVE 188
           MAT S +S+ S L  + P+     +Q+SPF++ +  +  S+ KK VSFRVQAAKLP GVE
Sbjct: 1   MATSSPISALSVLPRSAPIVSLLNQQLSPFNHRSPCSTISQPKKKVSFRVQAAKLPPGVE 60

Query: 189 LPKVQPKLEAPFLGFTRTAEIWNSRACMIGLVGTFIVELVINKGILQVIGVEIGKGLDLP 368
           LPKV+PK EAPFLGFTRTAEIWNSRACMIGL+G FIVEL++NKGILQVIGV+IGKGLDLP
Sbjct: 61  LPKVEPKFEAPFLGFTRTAEIWNSRACMIGLIGIFIVELILNKGILQVIGVDIGKGLDLP 120

Query: 369 L 371
           L
Sbjct: 121 L 121


>ref|XP_002309074.1| HLIP/One helix protein [Populus trichocarpa]
           gi|222855050|gb|EEE92597.1| HLIP/One helix protein
           [Populus trichocarpa]
          Length = 119

 Score =  156 bits (395), Expect = 3e-36
 Identities = 84/122 (68%), Positives = 100/122 (81%), Gaps = 3/122 (2%)
 Frame = +3

Query: 15  MATQSALSSS---FLQTALPLHHRTKQISPFHNLNQINKTSRNKKPVSFRVQAAKLPAGV 185
           MAT S+L SS    L   + LH R  ++S F++ +QI KTS  K+PV FR+QAAKLP GV
Sbjct: 1   MATPSSLLSSSSLLLTKPVTLHPRNGKVSLFNHRSQIIKTS--KEPV-FRIQAAKLPPGV 57

Query: 186 ELPKVQPKLEAPFLGFTRTAEIWNSRACMIGLVGTFIVELVINKGILQVIGVEIGKGLDL 365
           ELPKV+PK +APFLGFTRTAEIWNSRACM+GL+G F+VEL+INKGILQVIGV+IGKGLDL
Sbjct: 58  ELPKVEPKFQAPFLGFTRTAEIWNSRACMMGLIGVFVVELIINKGILQVIGVDIGKGLDL 117

Query: 366 PL 371
           PL
Sbjct: 118 PL 119


>gb|AAP23938.1| one helix protein [Ipomoea nil]
          Length = 116

 Score =  150 bits (378), Expect = 3e-34
 Identities = 78/116 (67%), Positives = 95/116 (81%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27  SALSSSFLQTALPLHHRTKQISPFHNLNQINKTSRNKKPVS-FRVQAAKLPAGVELPKVQ 203
           S LSSSFL  +L   H  +    F   N+I+ ++ + KP+S F++QAAKLPAGVELPK Q
Sbjct: 3   SPLSSSFL--SLSTTHTPQHNQLFFFTNRIHTSTISHKPISSFKLQAAKLPAGVELPKEQ 60

Query: 204 PKLEAPFLGFTRTAEIWNSRACMIGLVGTFIVELVINKGILQVIGVEIGKGLDLPL 371
           PKLE PFLGFTRTAEIWNSRACMIGL+GTFIVEL++N+GILQ+IGV++GKGLDLPL
Sbjct: 61  PKLEPPFLGFTRTAEIWNSRACMIGLIGTFIVELILNRGILQLIGVDVGKGLDLPL 116


>ref|XP_002531553.1| OHP, putative [Ricinus communis] gi|223528814|gb|EEF30819.1| OHP,
           putative [Ricinus communis]
          Length = 115

 Score =  146 bits (369), Expect = 3e-33
 Identities = 78/116 (67%), Positives = 92/116 (79%), Gaps = 1/116 (0%)
 Frame = +3

Query: 27  SALSSSFLQT-ALPLHHRTKQISPFHNLNQINKTSRNKKPVSFRVQAAKLPAGVELPKVQ 203
           +++SSS L T +L +  + +Q+  F N  QI      KKP S  V+AAKLP GVELPKVQ
Sbjct: 2   ASVSSSLLATKSLTIQPQNQQLLLFKNSAQIRIIP--KKPSSLTVRAAKLPPGVELPKVQ 59

Query: 204 PKLEAPFLGFTRTAEIWNSRACMIGLVGTFIVELVINKGILQVIGVEIGKGLDLPL 371
           PK  APFLGFTRTAEIWNSRACMIGL+GTFIVEL++NKGILQVIGV++GKGLDLPL
Sbjct: 60  PKFVAPFLGFTRTAEIWNSRACMIGLIGTFIVELILNKGILQVIGVDVGKGLDLPL 115


>gb|AFK33575.1| unknown [Lotus japonicus]
          Length = 112

 Score =  138 bits (348), Expect = 8e-31
 Identities = 77/116 (66%), Positives = 93/116 (80%), Gaps = 2/116 (1%)
 Frame = +3

Query: 30  ALSSSFLQTALPLHHRTKQISPFHNLNQINKTSRNKKPVSF-RVQAA-KLPAGVELPKVQ 203
           A SS  L+++L  +   +Q+     LN+ + T +NK  VSF RVQAA K PAGVE PKVQ
Sbjct: 2   ATSSIILRSSLSFYSTNQQVY----LNR-SATHKNKNGVSFFRVQAAAKPPAGVEFPKVQ 56

Query: 204 PKLEAPFLGFTRTAEIWNSRACMIGLVGTFIVELVINKGILQVIGVEIGKGLDLPL 371
           P+ +APFLGFT+TAE+WNSRACMIGL+GTFIVEL+INKGILQVIGVEIGKGL+LPL
Sbjct: 57  PQFKAPFLGFTKTAEVWNSRACMIGLIGTFIVELIINKGILQVIGVEIGKGLNLPL 112


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