BLASTX nr result

ID: Panax21_contig00029157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029157
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28616.3| unnamed protein product [Vitis vinifera]              220   1e-55
emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]   220   1e-55
ref|XP_002513525.1| nucleic acid binding protein, putative [Rici...   219   2e-55
emb|CBI17184.3| unnamed protein product [Vitis vinifera]              216   1e-54
ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containin...   216   1e-54

>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/134 (78%), Positives = 117/134 (87%), Gaps = 5/134 (3%)
 Frame = +1

Query: 1   GNPNSSSRQIYLTFPADSTFKEEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVK 180
           G  N  SRQIYLTFPADSTF+EEDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK
Sbjct: 275 GMVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVK 334

Query: 181 QILAKGNPHFVCDSRVLVKPYKEKGKIPDKK-----QQMEKGEFPACLSPSGLDSREPYD 345
            ILAKGNPHFVCD+RVLVKPYKEKGK+PDKK     QQ+E+GEF AC +P+GLDSR+PYD
Sbjct: 335 LILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYD 394

Query: 346 LPFGGRLVYSSQEM 387
           L  G R+ Y++Q+M
Sbjct: 395 LQLGARMFYNTQDM 408


>emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
          Length = 682

 Score =  220 bits (560), Expect = 1e-55
 Identities = 105/134 (78%), Positives = 117/134 (87%), Gaps = 5/134 (3%)
 Frame = +1

Query: 1   GNPNSSSRQIYLTFPADSTFKEEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVK 180
           G  N  SRQIYLTFPADSTF+EEDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK
Sbjct: 353 GMVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVK 412

Query: 181 QILAKGNPHFVCDSRVLVKPYKEKGKIPDKK-----QQMEKGEFPACLSPSGLDSREPYD 345
            ILAKGNPHFVCD+RVLVKPYKEKGK+PDKK     QQ+E+GEF AC +P+GLDSR+PYD
Sbjct: 413 LILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQQQVERGEFSACSTPTGLDSRDPYD 472

Query: 346 LPFGGRLVYSSQEM 387
           L  G R+ Y++Q+M
Sbjct: 473 LQLGARMFYNTQDM 486


>ref|XP_002513525.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223547433|gb|EEF48928.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 700

 Score =  219 bits (557), Expect = 2e-55
 Identities = 106/134 (79%), Positives = 116/134 (86%), Gaps = 5/134 (3%)
 Frame = +1

Query: 1   GNPNSSSRQIYLTFPADSTFKEEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVK 180
           G  N  SRQIYLTFPADSTF+EEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK
Sbjct: 361 GAMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVK 420

Query: 181 QILAKGNPHFVCDSRVLVKPYKEKGKIPDKK-----QQMEKGEFPACLSPSGLDSREPYD 345
            ILAKGNPHFVCDSRVLVKPYKEKGK+PDKK     QQME+G++ AC SPSGLDSREP+D
Sbjct: 421 LILAKGNPHFVCDSRVLVKPYKEKGKVPDKKQPHQQQQMERGDYSACSSPSGLDSREPFD 480

Query: 346 LPFGGRLVYSSQEM 387
           L  G R+  ++QEM
Sbjct: 481 LHLGARMFQNTQEM 494


>emb|CBI17184.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/140 (75%), Positives = 115/140 (82%), Gaps = 11/140 (7%)
 Frame = +1

Query: 1   GNPNSSSRQIYLTFPADSTFKEEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVK 180
           G  N  SRQIYLTFPADSTF+EEDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK
Sbjct: 266 GAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVK 325

Query: 181 QILAKGNPHFVCDSRVLVKPYKEKGKIPDKK-----------QQMEKGEFPACLSPSGLD 327
            ILAKGNPHFVCDSRVLVKPYKEKGK+P+KK           QQ+E+GE+  C SPSG+D
Sbjct: 326 LILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQQQQQQLERGEYSTCSSPSGID 385

Query: 328 SREPYDLPFGGRLVYSSQEM 387
            REPYDL  G R+ Y++QEM
Sbjct: 386 PREPYDLHLGARMFYNTQEM 405


>ref|XP_002274487.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Vitis vinifera]
          Length = 695

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/140 (75%), Positives = 115/140 (82%), Gaps = 11/140 (7%)
 Frame = +1

Query: 1   GNPNSSSRQIYLTFPADSTFKEEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVK 180
           G  N  SRQIYLTFPADSTF+EEDVSNYFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK
Sbjct: 346 GAVNPGSRQIYLTFPADSTFREEDVSNYFSIFGPVQDVRIPYQQKRMFGFVTFVYPETVK 405

Query: 181 QILAKGNPHFVCDSRVLVKPYKEKGKIPDKK-----------QQMEKGEFPACLSPSGLD 327
            ILAKGNPHFVCDSRVLVKPYKEKGK+P+KK           QQ+E+GE+  C SPSG+D
Sbjct: 406 LILAKGNPHFVCDSRVLVKPYKEKGKVPEKKQQHQQQQQQQQQQLERGEYSTCSSPSGID 465

Query: 328 SREPYDLPFGGRLVYSSQEM 387
            REPYDL  G R+ Y++QEM
Sbjct: 466 PREPYDLHLGARMFYNTQEM 485


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