BLASTX nr result

ID: Panax21_contig00029148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029148
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199603.1| uncharacterized protein [Arabidopsis thaliana] ...    92   3e-21
ref|XP_002512697.1| hypothetical protein RCOM_1438750 [Ricinus c...    94   2e-20
ref|XP_002865573.1| hypothetical protein ARALYDRAFT_494838 [Arab...    87   9e-19
ref|XP_002304626.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-18
ref|XP_002276426.1| PREDICTED: uncharacterized protein LOC100253...    76   5e-16

>ref|NP_199603.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177928|dbj|BAB11339.1| unnamed protein product
           [Arabidopsis thaliana] gi|26449488|dbj|BAC41870.1|
           unknown protein [Arabidopsis thaliana]
           gi|332008211|gb|AED95594.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 187

 Score = 92.4 bits (228), Expect(2) = 3e-21
 Identities = 44/71 (61%), Positives = 56/71 (78%)
 Frame = -3

Query: 353 QEEFNELSGGDPNASVIDLVRNSKEEEGQNFSLEDEIDHVANLFIMKVHKRMHMQKLESF 174
           +E+F +L      +SVID+VR SKEEEG+NF LEDEIDHVA+LFI + HK+M +QKL SF
Sbjct: 117 EEDFGDLEEEGQGSSVIDMVRTSKEEEGENFKLEDEIDHVADLFISRFHKQMKLQKLLSF 176

Query: 173 KRYQDMLHRSS 141
           KRYQ+ML R +
Sbjct: 177 KRYQEMLARGT 187



 Score = 34.3 bits (77), Expect(2) = 3e-21
 Identities = 20/53 (37%), Positives = 26/53 (49%)
 Frame = -1

Query: 517 QSSKASSAIVHYNMNELISHDHXXXXXXXXVLDYYNYKEENDKYSDLRHSLFE 359
           Q    + AIV YN        H          +Y  ++EE+DKY DLRH+LFE
Sbjct: 72  QDQDKNKAIVLYNSKASTMAHHE---------EYDVHEEESDKYPDLRHTLFE 115


>ref|XP_002512697.1| hypothetical protein RCOM_1438750 [Ricinus communis]
           gi|223548658|gb|EEF50149.1| hypothetical protein
           RCOM_1438750 [Ricinus communis]
          Length = 170

 Score = 93.6 bits (231), Expect(2) = 2e-20
 Identities = 48/70 (68%), Positives = 59/70 (84%)
 Frame = -3

Query: 353 QEEFNELSGGDPNASVIDLVRNSKEEEGQNFSLEDEIDHVANLFIMKVHKRMHMQKLESF 174
           +EEFN     DP  SVIDLV+NSK+E G++FSLEDEIDHVA+LFIM+ HK+M +QKLESF
Sbjct: 106 EEEFN-----DPGGSVIDLVKNSKDE-GEDFSLEDEIDHVADLFIMRFHKQMRLQKLESF 159

Query: 173 KRYQDMLHRS 144
           KR+Q+ML RS
Sbjct: 160 KRFQEMLARS 169



 Score = 30.0 bits (66), Expect(2) = 2e-20
 Identities = 11/16 (68%), Positives = 15/16 (93%)
 Frame = -1

Query: 403 EENDKYSDLRHSLFEE 356
           +E+DKY DLRH+LF+E
Sbjct: 90  DEDDKYPDLRHTLFDE 105


>ref|XP_002865573.1| hypothetical protein ARALYDRAFT_494838 [Arabidopsis lyrata subsp.
           lyrata] gi|297311408|gb|EFH41832.1| hypothetical protein
           ARALYDRAFT_494838 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score = 87.0 bits (214), Expect(2) = 9e-19
 Identities = 43/71 (60%), Positives = 56/71 (78%)
 Frame = -3

Query: 353 QEEFNELSGGDPNASVIDLVRNSKEEEGQNFSLEDEIDHVANLFIMKVHKRMHMQKLESF 174
           +EEF +L      +SVI++VRNSKEE G+NF LEDEIDHVA++FI + HK+M +QKL SF
Sbjct: 101 EEEFGDLEEEGQGSSVIEMVRNSKEE-GENFKLEDEIDHVADIFISRFHKQMKLQKLLSF 159

Query: 173 KRYQDMLHRSS 141
           KRYQ+ML R +
Sbjct: 160 KRYQEMLARGT 170



 Score = 31.2 bits (69), Expect(2) = 9e-19
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -1

Query: 502 SSAIVHYNMNELISHDHXXXXXXXXVLDYYNYKEENDKYSDLRHSLFE 359
           + AIV YN        H          +Y  +++++DKY DLRH+LFE
Sbjct: 61  NKAIVLYNSKAYTMAHHE---------EYDVHEDDSDKYPDLRHTLFE 99


>ref|XP_002304626.1| predicted protein [Populus trichocarpa] gi|222842058|gb|EEE79605.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score = 87.8 bits (216), Expect(2) = 6e-18
 Identities = 44/66 (66%), Positives = 55/66 (83%)
 Frame = -3

Query: 344 FNELSGGDPNASVIDLVRNSKEEEGQNFSLEDEIDHVANLFIMKVHKRMHMQKLESFKRY 165
           F+E    DP  S+IDLV+NSKE+ G++FSLEDEIDHVA+LFIM+ HK+M +QKLESFKR 
Sbjct: 126 FDEDDFEDPGGSIIDLVKNSKED-GEDFSLEDEIDHVADLFIMRFHKQMRLQKLESFKRN 184

Query: 164 QDMLHR 147
           Q+ML R
Sbjct: 185 QEMLMR 190



 Score = 27.7 bits (60), Expect(2) = 6e-18
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 418 YYNYKEENDKYSDLRHSLFEE 356
           YY Y   +DKY DL HSLF+E
Sbjct: 111 YYCY---DDKYPDLTHSLFDE 128


>ref|XP_002276426.1| PREDICTED: uncharacterized protein LOC100253147 [Vitis vinifera]
           gi|147801393|emb|CAN74736.1| hypothetical protein
           VITISV_044236 [Vitis vinifera]
           gi|296082236|emb|CBI21241.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score = 75.9 bits (185), Expect(2) = 5e-16
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = -3

Query: 311 SVIDLVRNSKEEEGQNFSLEDEIDHVANLFIMKVHKRMHMQKLESFKRYQDMLHRS 144
           SVI++V+NSKE+ G+NF LEDEID VA+LFI + HK+M +QK +SFKRYQ+ML RS
Sbjct: 132 SVIEMVKNSKEQ-GENFVLEDEIDQVADLFIKRFHKQMRIQKQQSFKRYQEMLERS 186



 Score = 33.1 bits (74), Expect(2) = 5e-16
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = -1

Query: 502 SSAIVHYNMNELISHDHXXXXXXXXVLDYYNYKEE--NDKYSDLRHSLFE 359
           S AIV YN     S           + DYY Y EE  ++KY DL HSLF+
Sbjct: 73  SKAIVVYNAMANESLSSPVCTELVQMEDYYGYDEEEGDEKYPDLTHSLFD 122


Top