BLASTX nr result

ID: Panax21_contig00029139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00029139
         (1151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab...   257   3e-66
gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Popu...   254   3e-65
gb|ACX47456.1| LIM1 [Hevea brasiliensis]                              253   6e-65
ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|1...   252   1e-64
ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricin...   252   1e-64

>gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum]
           gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein
           [Nicotiana tabacum]
          Length = 189

 Score =  257 bits (657), Expect = 3e-66
 Identities = 120/128 (93%), Positives = 126/128 (98%)
 Frame = -1

Query: 386 MSFTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 207
           MSF GTQQKCKACEKTVYP+ELLSADGV++HKSCFKCSHCKGTLKLSN+SSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60

Query: 206 HFEQLFKESGNFNKNFQSPAKLADKITPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 27
           HFEQLFKESGNFNKNFQSPAK A+K+TPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 120

Query: 26  VTVENQSY 3
           VTVENQSY
Sbjct: 121 VTVENQSY 128



 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 40/76 (52%), Positives = 56/76 (73%)
 Frame = -1

Query: 380 FTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHF 201
           F+GTQ+KC  C KT YP+E ++ +   +HK+CFKCSH   +L  SNY+++ G+LYCKPHF
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCKPHF 160

Query: 200 EQLFKESGNFNKNFQS 153
            QLFKE G++N   +S
Sbjct: 161 SQLFKEKGSYNHLIKS 176


>gb|ABK58469.1| LIM domain protein WLIM2a [Populus tremula x Populus alba]
          Length = 189

 Score =  254 bits (649), Expect = 3e-65
 Identities = 118/128 (92%), Positives = 125/128 (97%)
 Frame = -1

Query: 386 MSFTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 207
           MSFTGTQQKCKACEKTVYPMELLSADGV +HKSCFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60

Query: 206 HFEQLFKESGNFNKNFQSPAKLADKITPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 27
           HF+QLFKE+GNFNKNFQSPAK A+K+TPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFDQLFKETGNFNKNFQSPAKTAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 120

Query: 26  VTVENQSY 3
           VTVE+Q+Y
Sbjct: 121 VTVESQAY 128



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = -1

Query: 380 FTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHF 201
           F+GTQ+KC  C KT YP+E ++ +   +HKSCFKCSH    +  S+Y+++EGVLYCK HF
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSSYAALEGVLYCKHHF 160

Query: 200 EQLFKESGNFNKNFQSPA-KLADKITPE 120
            QLFKE G++N   +S + K A    PE
Sbjct: 161 SQLFKEKGSYNHLIKSASMKRAAAPVPE 188


>gb|ACX47456.1| LIM1 [Hevea brasiliensis]
          Length = 189

 Score =  253 bits (646), Expect = 6e-65
 Identities = 118/128 (92%), Positives = 124/128 (96%)
 Frame = -1

Query: 386 MSFTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 207
           MSFTGTQQKCKACEKTVYPMELLSADGV +HKSCFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60

Query: 206 HFEQLFKESGNFNKNFQSPAKLADKITPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 27
           HFEQLFKE+GNFNKNFQSPAK A+K+TPELTRSPSKAA MFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 26  VTVENQSY 3
           VTVE+Q+Y
Sbjct: 121 VTVESQAY 128



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 41/71 (57%), Positives = 54/71 (76%)
 Frame = -1

Query: 380 FTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHF 201
           F+GTQ+KC  C KT YP+E ++ +   +HKSCFKCSH   +L  SNY+++EGVLYCK HF
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALEGVLYCKHHF 160

Query: 200 EQLFKESGNFN 168
            QLFKE G++N
Sbjct: 161 SQLFKEKGSYN 171


>ref|XP_002312139.1| predicted protein [Populus trichocarpa] gi|118485190|gb|ABK94456.1|
           unknown [Populus trichocarpa]
           gi|222851959|gb|EEE89506.1| predicted protein [Populus
           trichocarpa]
          Length = 189

 Score =  252 bits (644), Expect = 1e-64
 Identities = 117/128 (91%), Positives = 124/128 (96%)
 Frame = -1

Query: 386 MSFTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 207
           MSFTGTQQKCKACEKTVYPMELLS DGV +HKSCFKC HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP 60

Query: 206 HFEQLFKESGNFNKNFQSPAKLADKITPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 27
           HF+QLFKE+GNFNKNFQSPAK A+K+TPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFDQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 120

Query: 26  VTVENQSY 3
           VTVE+Q+Y
Sbjct: 121 VTVESQAY 128



 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 40/71 (56%), Positives = 53/71 (74%)
 Frame = -1

Query: 380 FTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHF 201
           F+GTQ+KC  C KT YP+E ++ +   +HKSCFKCSH    +  SNY+++EGVLYCK HF
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHF 160

Query: 200 EQLFKESGNFN 168
            QLFKE G++N
Sbjct: 161 SQLFKEKGSYN 171


>ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricinus communis]
           gi|223530060|gb|EEF31981.1| Pollen-specific protein SF3,
           putative [Ricinus communis]
          Length = 189

 Score =  252 bits (643), Expect = 1e-64
 Identities = 117/128 (91%), Positives = 124/128 (96%)
 Frame = -1

Query: 386 MSFTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 207
           MSFTGTQQKCKACEKTVYPMELLSADGV +HKSCFKC HCKGTLKLSNYSSMEGV+YCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFHCKGTLKLSNYSSMEGVVYCKP 60

Query: 206 HFEQLFKESGNFNKNFQSPAKLADKITPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 27
           HFEQLFKE+GNFNKNFQSPAK A+K+TPELTRSPSKAA MFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 26  VTVENQSY 3
           VTVE+Q+Y
Sbjct: 121 VTVESQAY 128



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = -1

Query: 380 FTGTQQKCKACEKTVYPMELLSADGVDFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKPHF 201
           F+GTQ+KC  C KT YP+E ++ +   +HKSCFKCSH   ++  SNY+++EGVLYCK HF
Sbjct: 101 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSISPSNYAALEGVLYCKHHF 160

Query: 200 EQLFKESGNFNKNFQSPA-KLADKITPE 120
            QLFKE G++N   +S + K A    PE
Sbjct: 161 SQLFKEKGSYNHLIKSASMKRAAASVPE 188


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